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  5. LOC_Os05g42330.1

LOC_Os05g42330.1


Description : Secretory carrier-associated membrane protein 3 OS=Oryza sativa subsp. japonica (sp|q60ea5|scam3_orysj : 486.0)


Gene families : OG0000869 (Archaeplastida) Phylogenetic Tree(s): OG0000869_tree ,
OG_05_0000831 (LandPlants) Phylogenetic Tree(s): OG_05_0000831_tree ,
OG_06_0000621 (SeedPlants) Phylogenetic Tree(s): OG_06_0000621_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g42330.1
Cluster HCCA: Cluster_353

Target Alias Description ECC score Gene Family Method Actions
Cre02.g089900 No alias Secretory carrier-associated membrane protein 5 OS=Oryza... 0.03 Archaeplastida
GSVIVT01030566001 No alias Secretory carrier-associated membrane protein 1... 0.04 Archaeplastida
LOC_Os08g06440.1 No alias Secretory carrier-associated membrane protein 6 OS=Oryza... 0.03 Archaeplastida
MA_129755g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp2g20380.1 No alias Putative secretory carrier-associated membrane protein 1... 0.02 Archaeplastida
Pp3c10_9510V3.1 No alias secretory carrier 3 0.03 Archaeplastida
Pp3c2_16160V3.1 No alias secretory carrier 3 0.02 Archaeplastida
Pp3c5_14240V3.1 No alias secretory carrier 3 0.05 Archaeplastida
Smo141352 No alias Secretory carrier-associated membrane protein 1 OS=Oryza... 0.03 Archaeplastida
Solyc07g054490.3.1 No alias Secretory carrier-associated membrane protein 3... 0.09 Archaeplastida
Solyc08g076210.3.1 No alias Secretory carrier-associated membrane protein 4... 0.06 Archaeplastida
Solyc12g010750.2.1 No alias Secretory carrier-associated membrane protein 1 OS=Oryza... 0.03 Archaeplastida
Zm00001e015529_P002 No alias Secretory carrier-associated membrane protein 6 OS=Oryza... 0.08 Archaeplastida
Zm00001e027375_P001 No alias Secretory carrier-associated membrane protein 3 OS=Oryza... 0.19 Archaeplastida
Zm00001e032063_P002 No alias Secretory carrier-associated membrane protein 3 OS=Oryza... 0.11 Archaeplastida
Zm00001e041560_P001 No alias Secretory carrier-associated membrane protein 6 OS=Oryza... 0.1 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0005484 SNAP receptor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006621 protein retention in ER lumen IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
BP GO:0032507 maintenance of protein location in cell IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0045185 maintenance of protein location IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0051651 maintenance of location in cell IEP Neighborhood
BP GO:0072595 maintenance of protein localization in organelle IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR007273 SCAMP 92 262
No external refs found!