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  5. LOC_Os05g42970.1

LOC_Os05g42970.1


Description : no hits & (original description: none)


Gene families : OG0000018 (Archaeplastida) Phylogenetic Tree(s): OG0000018_tree ,
OG_05_0000007 (LandPlants) Phylogenetic Tree(s): OG_05_0000007_tree ,
OG_06_0000001 (SeedPlants) Phylogenetic Tree(s): OG_06_0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g42970.1
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g28420.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g01420.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g25520.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g07680.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g06100.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g23280.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g27860.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g10380.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g16900.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g27900.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g11850.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g31900.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os07g39610.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g04850.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g08670.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g27180.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g07330.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os09g13900.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g07554.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os11g14350.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g17410.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os12g01640.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g14820.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g16400.1 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 889 1002
No external refs found!