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  5. LOC_Os05g43090.1

LOC_Os05g43090.1


Description : GDSL esterase/lipase At1g28570 OS=Arabidopsis thaliana (sp|q9fxj1|gdl6_arath : 191.0)


Gene families : OG0000147 (Archaeplastida) Phylogenetic Tree(s): OG0000147_tree ,
OG_05_0000060 (LandPlants) Phylogenetic Tree(s): OG_05_0000060_tree ,
OG_06_0014149 (SeedPlants) Phylogenetic Tree(s): OG_06_0014149_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g43090.1
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00146420 evm_27.TU.AmTr_v1... GDSL esterase/lipase At1g28570 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00016p00147040 evm_27.TU.AmTr_v1... GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00016p00149780 evm_27.TU.AmTr_v1... GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00049p00054830 evm_27.TU.AmTr_v1... GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G28570 No alias SGNH hydrolase-type esterase superfamily protein 0.04 Archaeplastida
AT1G28580 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Archaeplastida
AT1G28590 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.04 Archaeplastida
AT1G28600 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Archaeplastida
AT1G28650 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.04 Archaeplastida
AT1G28670 ARAB-1 GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Archaeplastida
Gb_09270 No alias GDSL esterase/lipase At1g28650 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_16009 No alias GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_16378 No alias GDSL esterase/lipase At1g28650 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Gb_16975 No alias GDSL esterase/lipase At1g28650 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g11750.1 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g11760.1 No alias GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g11790.1 No alias GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.09 Archaeplastida
LOC_Os05g11950.1 No alias GDSL esterase/lipase At1g28580 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os06g34120.1 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_190687g0010 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_60155g0010 No alias GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_76943g0010 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp7g13650.1 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc01g099050.3.1 No alias GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc01g099060.3.1 No alias Acetylajmalan esterase OS=Rauvolfia serpentina... 0.03 Archaeplastida
Solyc12g096620.1.1 No alias GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e011116_P002 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e014225_P001 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e016450_P001 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e027180_P002 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e027181_P001 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e030049_P001 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e030050_P001 No alias GDSL esterase/lipase At1g28570 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e032079_P005 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e036463_P001 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006417 regulation of translation IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
BP GO:0017148 negative regulation of translation IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0030597 RNA glycosylase activity IEP Neighborhood
MF GO:0030598 rRNA N-glycosylase activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0034248 regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0051248 negative regulation of protein metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140102 catalytic activity, acting on a rRNA IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!