Description : component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage response heterodimer
Gene families : OG0001412 (Archaeplastida) Phylogenetic Tree(s): OG0001412_tree ,
OG_05_0001772 (LandPlants) Phylogenetic Tree(s): OG_05_0001772_tree ,
OG_06_0001623 (SeedPlants) Phylogenetic Tree(s): OG_06_0001623_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os05g43610.1 | |
Cluster | HCCA: Cluster_173 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00092p00067800 | evm_27.TU.AmTr_v1... | DNA damage response.BRCA1–BARD1 DNA-damage response... | 0.06 | Archaeplastida | |
AT1G04020 | BARD1, ROW1, ATBARD1 | breast cancer associated RING 1 | 0.04 | Archaeplastida | |
Cpa|evm.model.tig00020537.14 | No alias | DNA damage response.BRCA1–BARD1 DNA-damage response... | 0.02 | Archaeplastida | |
Cpa|evm.model.tig00020904.127 | No alias | No description available | 0.02 | Archaeplastida | |
Cre07.g334650 | No alias | DNA damage response.BRCA1–BARD1 DNA-damage response... | 0.01 | Archaeplastida | |
Gb_00493 | No alias | component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... | 0.05 | Archaeplastida | |
MA_12220g0020 | No alias | component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... | 0.05 | Archaeplastida | |
MA_187851g0010 | No alias | Protein BREAST CANCER SUSCEPTIBILITY 1 homolog... | 0.06 | Archaeplastida | |
MA_66542g0010 | No alias | Protein BREAST CANCER SUSCEPTIBILITY 1 homolog... | 0.07 | Archaeplastida | |
Mp1g00070.1 | No alias | component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... | 0.1 | Archaeplastida | |
Smo414577 | No alias | Protein biosynthesis.translation... | 0.03 | Archaeplastida | |
Solyc06g008210.4.1 | No alias | component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... | 0.1 | Archaeplastida | |
Zm00001e007590_P001 | No alias | component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... | 0.07 | Archaeplastida | |
Zm00001e032102_P001 | No alias | component BRCA1|BARD1 of BRCA1–BARD1 DNA-damage... | 0.07 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003677 | DNA binding | IEP | Neighborhood |
MF | GO:0003682 | chromatin binding | IEP | Neighborhood |
MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005524 | ATP binding | IEP | Neighborhood |
CC | GO:0005667 | transcription factor complex | IEP | Neighborhood |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
BP | GO:0006260 | DNA replication | IEP | Neighborhood |
BP | GO:0006270 | DNA replication initiation | IEP | Neighborhood |
BP | GO:0006281 | DNA repair | IEP | Neighborhood |
BP | GO:0006298 | mismatch repair | IEP | Neighborhood |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0006950 | response to stress | IEP | Neighborhood |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Neighborhood |
BP | GO:0007059 | chromosome segregation | IEP | Neighborhood |
MF | GO:0008017 | microtubule binding | IEP | Neighborhood |
MF | GO:0008092 | cytoskeletal protein binding | IEP | Neighborhood |
MF | GO:0008144 | drug binding | IEP | Neighborhood |
BP | GO:0009262 | deoxyribonucleotide metabolic process | IEP | Neighborhood |
BP | GO:0009263 | deoxyribonucleotide biosynthetic process | IEP | Neighborhood |
BP | GO:0009987 | cellular process | IEP | Neighborhood |
MF | GO:0015631 | tubulin binding | IEP | Neighborhood |
MF | GO:0016740 | transferase activity | IEP | Neighborhood |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Neighborhood |
MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
CC | GO:0030915 | Smc5-Smc6 complex | IEP | Neighborhood |
MF | GO:0030983 | mismatched DNA binding | IEP | Neighborhood |
MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
BP | GO:0033554 | cellular response to stress | IEP | Neighborhood |
MF | GO:0034061 | DNA polymerase activity | IEP | Neighborhood |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
MF | GO:0043168 | anion binding | IEP | Neighborhood |
BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
CC | GO:0044427 | chromosomal part | IEP | Neighborhood |
BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
BP | GO:0050896 | response to stimulus | IEP | Neighborhood |
BP | GO:0051301 | cell division | IEP | Neighborhood |
BP | GO:0051716 | cellular response to stimulus | IEP | Neighborhood |
BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
CC | GO:0106068 | SUMO ligase complex | IEP | Neighborhood |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
CC | GO:1902494 | catalytic complex | IEP | Neighborhood |
CC | GO:1990234 | transferase complex | IEP | Neighborhood |
No external refs found! |