LOC_Os05g43870.1

Description : GTPase effector (RIP)

Gene families : OG0010548 (Archaeplastida) Phylogenetic Tree(s): OG0010548_tree ,
OG_05_0010548 (LandPlants) Phylogenetic Tree(s): OG_05_0010548_tree ,
OG_06_0010203 (SeedPlants) Phylogenetic Tree(s): OG_06_0010203_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os05g43870.1
Cluster	HCCA: Cluster_80

Target	Alias	Description	ECC score	Gene Family Method	Actions
AMTR_s00058p00212160	evm_27.TU.AmTr_v1...	Multi-process regulation.Rop GTPase regulatory...	0.04	Archaeplastida
AT1G17140	RIP1, ICR1	interactor of constitutive active rops 1	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0003905	alkylbase DNA N-glycosylase activity	IEP	Neighborhood
BP	GO:0006284	base-excision repair	IEP	Neighborhood
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Neighborhood
MF	GO:0016831	carboxy-lyase activity	IEP	Neighborhood
MF	GO:0019104	DNA N-glycosylase activity	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0043733	DNA-3-methylbase glycosylase activity	IEP	Neighborhood
MF	GO:0045735	nutrient reservoir activity	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!