LOC_Os05g44400.1


Description : transcription factor (GATA)


Gene families : OG0000094 (Archaeplastida) Phylogenetic Tree(s): OG0000094_tree ,
OG_05_0000055 (LandPlants) Phylogenetic Tree(s): OG_05_0000055_tree ,
OG_06_0000244 (SeedPlants) Phylogenetic Tree(s): OG_06_0000244_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g44400.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00121410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AT2G18380 GATA20 GATA transcription factor 20 0.03 Archaeplastida
AT2G28340 GATA13 GATA transcription factor 13 0.02 Archaeplastida
AT2G45050 GATA2 GATA transcription factor 2 0.07 Archaeplastida
AT3G20750 GATA29 GATA transcription factor 29 0.03 Archaeplastida
AT3G45170 GATA14 GATA transcription factor 14 0.02 Archaeplastida
AT3G50870 HAN, MNP, GATA18 GATA type zinc finger transcription factor family protein 0.03 Archaeplastida
AT3G54810 BME3-ZF, BME3, GATA8 Plant-specific GATA-type zinc finger transcription... 0.03 Archaeplastida
AT4G16141 No alias GATA type zinc finger transcription factor family protein 0.03 Archaeplastida
AT4G36240 GATA7 GATA transcription factor 7 0.03 Archaeplastida
AT5G26930 GATA23 GATA transcription factor 23 0.03 Archaeplastida
AT5G49300 GATA16 GATA transcription factor 16 0.03 Archaeplastida
Cre06.g266950 No alias No description available 0.02 Archaeplastida
GSVIVT01016265001 No alias GATA transcription factor 8 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01035614001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
Gb_06864 No alias transcription factor (GATA) 0.03 Archaeplastida
Gb_24250 No alias transcription factor (GATA) 0.03 Archaeplastida
LOC_Os03g05160.1 No alias transcription factor (GATA) 0.05 Archaeplastida
LOC_Os10g40810.1 No alias transcription factor (GATA) 0.04 Archaeplastida
MA_92522g0010 No alias transcription factor (GATA) 0.02 Archaeplastida
Smo69510 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
Solyc01g110310.3.1 No alias transcription factor (GATA) 0.02 Archaeplastida
Solyc02g062760.4.1 No alias transcription factor (GATA) 0.02 Archaeplastida
Solyc05g056120.3.1 No alias transcription factor (GATA) 0.03 Archaeplastida
Solyc06g075140.3.1 No alias transcription factor (GATA) 0.02 Archaeplastida
Solyc08g066510.3.1 No alias transcription factor (GATA) 0.07 Archaeplastida
Solyc09g075610.3.1 No alias transcription factor (GATA) 0.02 Archaeplastida
Solyc10g018560.2.1 No alias transcription factor (GATA) 0.06 Archaeplastida
Zm00001e015260_P001 No alias transcription factor (GATA) 0.02 Archaeplastida
Zm00001e018438_P001 No alias transcription factor (GATA) 0.03 Archaeplastida
Zm00001e020243_P001 No alias transcription factor (GATA) 0.05 Archaeplastida
Zm00001e023650_P003 No alias transcription factor (GATA) 0.03 Archaeplastida
Zm00001e026601_P001 No alias transcription factor (GATA) 0.03 Archaeplastida
Zm00001e029060_P002 No alias transcription factor (GATA) 0.07 Archaeplastida
Zm00001e032513_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e039467_P001 No alias transcription factor (GATA) 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR000679 Znf_GATA 255 288
No external refs found!