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  5. AMTR_s00006p00263930

AMTR_s00006p00263930 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00006.261

No description available


Gene families : OG0006463 (Archaeplastida) Phylogenetic Tree(s): OG0006463_tree ,
OG_05_0004165 (LandPlants) Phylogenetic Tree(s): OG_05_0004165_tree ,
OG_06_0002860 (SeedPlants) Phylogenetic Tree(s): OG_06_0002860_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00006p00263930
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00263840 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00061p00086750 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00061p00111020 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00061p00116100 evm_27.TU.AmTr_v1... Probable disease resistance RPP8-like protein 2... 0.03 Archaeplastida
AMTR_s00061p00144510 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00074p00193320 evm_27.TU.AmTr_v1... Putative disease resistance protein At1g50180... 0.05 Archaeplastida
AMTR_s00088p00152640 evm_27.TU.AmTr_v1... No description available 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Neighborhood
BP GO:0000077 DNA damage checkpoint IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
CC GO:0030896 checkpoint clamp complex IEP Neighborhood
BP GO:0031570 DNA integrity checkpoint IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
InterPro domains Description Start Stop
IPR002182 NB-ARC 54 111
No external refs found!