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  5. LOC_Os05g45720.1

LOC_Os05g45720.1


Description : starch synthase (SSIV)


Gene families : OG0000161 (Archaeplastida) Phylogenetic Tree(s): OG0000161_tree ,
OG_05_0002023 (LandPlants) Phylogenetic Tree(s): OG_05_0002023_tree ,
OG_06_0007551 (SeedPlants) Phylogenetic Tree(s): OG_06_0007551_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g45720.1
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00214840 evm_27.TU.AmTr_v1... Probable starch synthase 4, chloroplastic/amyloplastic... 0.01 Archaeplastida
Gb_37508 No alias Probable starch synthase 4, chloroplastic/amyloplastic... 0.02 Archaeplastida
LOC_Os06g12450.1 No alias starch synthase (SSII) 0.01 Archaeplastida
MA_10429460g0020 No alias Granule-bound starch synthase 1,... 0.03 Archaeplastida
Pp3c21_6821V3.1 No alias starch synthase 2 0.02 Archaeplastida
Zm00001e030868_P001 No alias starch synthase (SSII) 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0071586 CAAX-box protein processing IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 423 660
IPR001296 Glyco_trans_1 716 870
No external refs found!