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  5. LOC_Os05g46350.1

LOC_Os05g46350.1


Description : no hits & (original description: none)


Gene families : OG0000181 (Archaeplastida) Phylogenetic Tree(s): OG0000181_tree ,
OG_05_0000202 (LandPlants) Phylogenetic Tree(s): OG_05_0000202_tree ,
OG_06_0003915 (SeedPlants) Phylogenetic Tree(s): OG_06_0003915_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g46350.1
Cluster HCCA: Cluster_263

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00158910 evm_27.TU.AmTr_v1... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00021p00225710 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00080p00182120 evm_27.TU.AmTr_v1... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT2G33990 iqd9 IQ-domain 9 0.03 Archaeplastida
AT3G15050 IQD10 IQ-domain 10 0.03 Archaeplastida
AT4G00820 iqd17 IQ-domain 17 0.03 Archaeplastida
AT4G10640 IQD16 IQ-domain 16 0.02 Archaeplastida
AT5G35670 iqd33 IQ-domain 33 0.03 Archaeplastida
MA_40034g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_81306g0020 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c12_25060V3.1 No alias IQ-domain 2 0.02 Archaeplastida
Pp3c21_11850V3.1 No alias IQ-domain 3 0.03 Archaeplastida
Pp3c4_3290V3.1 No alias IQ-domain 2 0.02 Archaeplastida
Solyc10g008790.3.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 80 99
IPR000048 IQ_motif_EF-hand-BS 102 119
No external refs found!