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  5. LOC_Os05g48100.1

LOC_Os05g48100.1


Description : no hits & (original description: none)


Gene families : OG0000018 (Archaeplastida) Phylogenetic Tree(s): OG0000018_tree ,
OG_05_0000007 (LandPlants) Phylogenetic Tree(s): OG_05_0000007_tree ,
OG_06_0000001 (SeedPlants) Phylogenetic Tree(s): OG_06_0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g48100.1
Cluster HCCA: Cluster_71

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g03590.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g18550.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g24530.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os01g33630.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g38810.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g08280.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g56780.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g03710.1 No alias Subtilisin-like protease SBT3.10 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os04g06100.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g07170.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g07930.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g11410.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g28650.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g16580.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g26100.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os05g39460.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g48110.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g50880.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g15850.1 No alias Ethylene receptor 4 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os06g16900.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g19870.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g21150.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g35350.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g42580.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g46120.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g04870.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g08950.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g16080.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g26280.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g30750.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os09g01900.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g04200.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os09g09420.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g16890.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os10g07562.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g08370.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g08650.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g29010.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os11g14350.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os11g26250.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os11g35762.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os11g41050.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g05240.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g11600.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g13080.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g14200.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g14820.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g36480.1 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0032200 telomere organization IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0060249 anatomical structure homeostasis IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!