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  5. AMTR_s00006p00266250

AMTR_s00006p00266250 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00006.285

Description : Protein trichome birefringence-like 20 OS=Arabidopsis thaliana


Gene families : OG0000288 (Archaeplastida) Phylogenetic Tree(s): OG0000288_tree ,
OG_05_0020348 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0001537 (SeedPlants) Phylogenetic Tree(s): OG_06_0001537_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00006p00266250
Cluster HCCA: Cluster_278

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00112880 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xyloglucan.modification and... 0.04 Archaeplastida
AT3G02440 TBL20 TRICHOME BIREFRINGENCE-LIKE 20 0.03 Archaeplastida
AT3G28150 TBL22 TRICHOME BIREFRINGENCE-LIKE 22 0.01 Archaeplastida
GSVIVT01019502001 No alias Protein trichome birefringence-like 23 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01036469001 No alias Protein trichome birefringence-like 19 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_25866 No alias mannan O-acetyltransferase (MOAT) 0.03 Archaeplastida
LOC_Os01g46400.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os02g49650.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os02g49660.1 No alias Protein trichome birefringence-like 20 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os06g12820.1 No alias Protein ALTERED XYLOGLUCAN 4-like OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os06g12860.1 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.01 Archaeplastida
LOC_Os06g16250.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os07g15320.1 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp8g08270.1 No alias mannan O-acetyltransferase (MOAT) 0.02 Archaeplastida
Pp3c16_10090V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 25 0.04 Archaeplastida
Pp3c16_2250V3.1 No alias TRICHOME BIREFRINGENCE-LIKE 25 0.03 Archaeplastida
Solyc02g089710.3.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.02 Archaeplastida
Solyc03g046270.4.1 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e004741_P002 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e015715_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e020298_P002 No alias Protein trichome birefringence-like 19 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e020949_P001 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e030881_P001 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e030883_P001 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e036072_P001 No alias Protein ALTERED XYLOGLUCAN 4 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR026057 PC-Esterase 128 169
IPR025846 PMR5_N_dom 74 127
No external refs found!