LOC_Os05g48320.1

Description : component RPL37a of LSU proteome component

Gene families : OG0001934 (Archaeplastida) Phylogenetic Tree(s): OG0001934_tree ,
OG_05_0002267 (LandPlants) Phylogenetic Tree(s): OG_05_0002267_tree ,
OG_06_0003026 (SeedPlants) Phylogenetic Tree(s): OG_06_0003026_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os05g48320.1
Cluster	HCCA: Cluster_140

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00151080	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	Archaeplastida
AT3G60245	No alias	Zinc-binding ribosomal protein family protein	0.23	Archaeplastida
Cpa\|evm.model.tig00000718.64	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.13	Archaeplastida
Cre06.g257150	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.23	Archaeplastida
GSVIVT01013278001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.22	Archaeplastida
GSVIVT01018328001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.26	Archaeplastida
Gb_12624	No alias	component RPL37a of LSU proteome component	0.03	Archaeplastida
Gb_13072	No alias	component RPL37a of LSU proteome component	0.15	Archaeplastida
MA_158457g0010	No alias	component RPL37a of LSU proteome component	0.07	Archaeplastida
MA_320643g0010	No alias	no hits & (original description: none)	0.14	Archaeplastida
MA_4732g0010	No alias	component RPL37a of LSU proteome component	0.04	Archaeplastida
Mp6g07870.1	No alias	component RPL37a of LSU proteome component	0.02	Archaeplastida
Pp3c11_2550V3.1	No alias	Zinc-binding ribosomal protein family protein	0.29	Archaeplastida
Pp3c1_1530V3.1	No alias	Zinc-binding ribosomal protein family protein	0.27	Archaeplastida
Pp3c2_34770V3.1	No alias	Zinc-binding ribosomal protein family protein	0.2	Archaeplastida
Pp3c3_1620V3.1	No alias	Zinc-binding ribosomal protein family protein	0.19	Archaeplastida
Pp3c7_21150V3.1	No alias	Zinc-binding ribosomal protein family protein	0.22	Archaeplastida
Smo227221	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.08	Archaeplastida
Solyc08g007140.4.1	No alias	component RPL37a of LSU proteome component	0.03	Archaeplastida
Solyc08g077710.3.1	No alias	component RPL37a of LSU proteome component	0.02	Archaeplastida
Solyc08g077720.3.1	No alias	component RPL37a of LSU proteome component	0.09	Archaeplastida
Zm00001e008395_P001	No alias	component RPL37a of LSU proteome component	0.18	Archaeplastida
Zm00001e013684_P001	No alias	component RPL37a of LSU proteome component	0.26	Archaeplastida
Zm00001e025201_P002	No alias	component RPL37a of LSU proteome component	0.06	Archaeplastida
Zm00001e026482_P001	No alias	component RPL37a of LSU proteome component	0.24	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0003746	translation elongation factor activity	IEP	Neighborhood
BP	GO:0006414	translational elongation	IEP	Neighborhood
BP	GO:0006448	regulation of translational elongation	IEP	Neighborhood
BP	GO:0006449	regulation of translational termination	IEP	Neighborhood
BP	GO:0006457	protein folding	IEP	Neighborhood
BP	GO:0007021	tubulin complex assembly	IEP	Neighborhood
BP	GO:0007023	post-chaperonin tubulin folding pathway	IEP	Neighborhood
MF	GO:0008135	translation factor activity, RNA binding	IEP	Neighborhood
BP	GO:0009891	positive regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0009893	positive regulation of metabolic process	IEP	Neighborhood
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0010628	positive regulation of gene expression	IEP	Neighborhood
CC	GO:0016272	prefoldin complex	IEP	Neighborhood
MF	GO:0019843	rRNA binding	IEP	Neighborhood
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Neighborhood
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	Neighborhood
BP	GO:0032270	positive regulation of cellular protein metabolic process	IEP	Neighborhood
BP	GO:0034250	positive regulation of cellular amide metabolic process	IEP	Neighborhood
BP	GO:0042254	ribosome biogenesis	IEP	Neighborhood
MF	GO:0043021	ribonucleoprotein complex binding	IEP	Neighborhood
MF	GO:0043022	ribosome binding	IEP	Neighborhood
BP	GO:0043243	positive regulation of protein complex disassembly	IEP	Neighborhood
BP	GO:0043244	regulation of protein complex disassembly	IEP	Neighborhood
MF	GO:0044877	protein-containing complex binding	IEP	Neighborhood
BP	GO:0045727	positive regulation of translation	IEP	Neighborhood
BP	GO:0045901	positive regulation of translational elongation	IEP	Neighborhood
BP	GO:0045905	positive regulation of translational termination	IEP	Neighborhood
MF	GO:0048487	beta-tubulin binding	IEP	Neighborhood
BP	GO:0048522	positive regulation of cellular process	IEP	Neighborhood
MF	GO:0051082	unfolded protein binding	IEP	Neighborhood
BP	GO:0051128	regulation of cellular component organization	IEP	Neighborhood
BP	GO:0051130	positive regulation of cellular component organization	IEP	Neighborhood
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051247	positive regulation of protein metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002674	Ribosomal_L37ae	4	88

External Links

No external refs found!

LOC_Os05g48320.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation