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  5. LOC_Os05g48620.1

LOC_Os05g48620.1


Description : golgin (GC5/TMF)


Gene families : OG0003240 (Archaeplastida) Phylogenetic Tree(s): OG0003240_tree ,
OG_05_0004501 (LandPlants) Phylogenetic Tree(s): OG_05_0004501_tree ,
OG_06_0004575 (SeedPlants) Phylogenetic Tree(s): OG_06_0004575_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g48620.1
Cluster HCCA: Cluster_329

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01038690001 No alias Vesicle trafficking.target membrane tethering.Golgi... 0.03 Archaeplastida
Gb_20198 No alias golgin (GC5/TMF) 0.04 Archaeplastida
MA_10430555g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc06g066610.4.1 No alias golgin (GC5/TMF) 0.06 Archaeplastida
Zm00001e026510_P001 No alias Golgin candidate 5 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
InterPro domains Description Start Stop
IPR022091 TMF_TATA-bd 911 1020
IPR022092 TMF_DNA-bd 511 582
No external refs found!