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  5. LOC_Os05g48890.1

LOC_Os05g48890.1


Description : fasciclin-type arabinogalactan protein


Gene families : OG0000994 (Archaeplastida) Phylogenetic Tree(s): OG0000994_tree ,
OG_05_0000629 (LandPlants) Phylogenetic Tree(s): OG_05_0000629_tree ,
OG_06_0000746 (SeedPlants) Phylogenetic Tree(s): OG_06_0000746_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g48890.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00224100 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
AMTR_s00007p00166710 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
AMTR_s00393p00013250 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
AT1G03870 FLA9 FASCICLIN-like arabinoogalactan 9 0.07 Archaeplastida
AT2G04780 FLA7 FASCICLIN-like arabinoogalactan 7 0.04 Archaeplastida
AT2G20520 FLA6 FASCICLIN-like arabinogalactan 6 0.03 Archaeplastida
AT5G03170 ATFLA11, FLA11 FASCICLIN-like arabinogalactan-protein 11 0.03 Archaeplastida
AT5G44130 FLA13 FASCICLIN-like arabinogalactan protein 13 precursor 0.03 Archaeplastida
AT5G60490 FLA12 FASCICLIN-like arabinogalactan-protein 12 0.05 Archaeplastida
GSVIVT01020616001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 Archaeplastida
GSVIVT01025167001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 Archaeplastida
GSVIVT01025660001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.06 Archaeplastida
GSVIVT01025662001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.06 Archaeplastida
GSVIVT01025663001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
GSVIVT01025669001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
GSVIVT01025671001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 Archaeplastida
Gb_01998 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
LOC_Os01g06580.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
LOC_Os02g20540.1 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida
LOC_Os02g20560.1 No alias fasciclin-type arabinogalactan protein 0.06 Archaeplastida
LOC_Os05g07060.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
LOC_Os08g39270.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
Solyc06g075220.1.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
Solyc07g053540.1.1 No alias fasciclin-type arabinogalactan protein 0.07 Archaeplastida
Solyc09g007650.3.1 No alias fasciclin-type arabinogalactan protein 0.07 Archaeplastida
Solyc09g007660.1.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
Solyc11g069250.2.1 No alias fasciclin-type arabinogalactan protein 0.06 Archaeplastida
Zm00001e010053_P001 No alias fasciclin-type arabinogalactan protein 0.13 Archaeplastida
Zm00001e020209_P002 No alias fasciclin-type arabinogalactan protein 0.06 Archaeplastida
Zm00001e026526_P001 No alias fasciclin-type arabinogalactan protein 0.06 Archaeplastida
Zm00001e027481_P001 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000782 FAS1_domain 53 187
No external refs found!