LOC_Os05g49010.1

Description : transcription factor (ERF)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0020437 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os05g49010.1
Cluster	HCCA: Cluster_7

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00194910	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00010p00240320	evm_27.TU.AmTr_v1...	Ethylene-responsive transcription factor FZP OS=Oryza...	0.04	Archaeplastida
AMTR_s00016p00238800	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00017p00232330	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00025p00249140	evm_27.TU.AmTr_v1...	Cell wall.cutin and suberin.biosynthesis...	0.05	Archaeplastida
AMTR_s00039p00088760	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00040p00180260	evm_27.TU.AmTr_v1...	No description available	0.05	Archaeplastida
AMTR_s00049p00214620	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AMTR_s00051p00204250	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00069p00132820	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.04	Archaeplastida
AMTR_s00069p00140780	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00077p00141890	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AMTR_s00089p00102760	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00099p00029210	evm_27.TU.AmTr_v1...	No description available	0.03	Archaeplastida
AMTR_s00129p00112550	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AT1G06160	ORA59	octadecanoid-responsive Arabidopsis AP2/ERF 59	0.04	Archaeplastida
AT1G15360	WIN1, SHN1	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT1G22190	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G28160	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT1G28370	ATERF11, ERF11	ERF domain protein 11	0.03	Archaeplastida
AT1G43160	RAP2.6	related to AP2 6	0.04	Archaeplastida
AT1G71520	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT1G77200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT2G20880	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT2G22200	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT2G31230	ATERF15, ERF15	ethylene-responsive element binding factor 15	0.03	Archaeplastida
AT2G44840	ATERF13, ERF13, EREBP	ethylene-responsive element binding factor 13	0.04	Archaeplastida
AT2G47520	HRE2	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT3G23230	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT3G23240	ERF1, ATERF1	ethylene response factor 1	0.03	Archaeplastida
AT3G57600	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
AT4G16750	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G17490	ERF-6-6, ERF6, ATERF6	ethylene responsive element binding factor 6	0.04	Archaeplastida
AT4G17500	ERF-1, ATERF-1	ethylene responsive element binding factor 1	0.03	Archaeplastida
AT4G25490	DREB1B, ATCBF1, CBF1	C-repeat/DRE binding factor 1	0.03	Archaeplastida
AT4G27950	CRF4	cytokinin response factor 4	0.04	Archaeplastida
AT4G28140	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G34410	RRTF1	redox responsive transcription factor 1	0.03	Archaeplastida
AT5G11190	SHN3	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G13910	LEP	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT5G18560	PUCHI	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G44210	ATERF-9, ERF9, ATERF9	erf domain protein 9	0.03	Archaeplastida
Cre14.g620500	No alias	No description available	0.01	Archaeplastida
GSVIVT01001089001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01006277001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01008649001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01013931001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01015540001	No alias	Cell wall.cutin and suberin.biosynthesis...	0.03	Archaeplastida
GSVIVT01017315001	No alias	Cell wall.cutin and suberin.biosynthesis...	0.04	Archaeplastida
GSVIVT01017572001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01033793001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
GSVIVT01036228001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
Gb_02790	No alias	transcription factor (ERF)	0.05	Archaeplastida
Gb_03783	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_08642	No alias	Ethylene-responsive transcription factor ABI4 OS=Oryza...	0.04	Archaeplastida
Gb_08781	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_09495	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Gb_10809	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Gb_17501	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_19320	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_23321	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_25978	No alias	Ethylene-responsive transcription factor ABI4...	0.03	Archaeplastida
Gb_34285	No alias	transcription factor (DREB)	0.04	Archaeplastida
Gb_41294	No alias	transcription factor (DREB)	0.05	Archaeplastida
Gb_41433	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_41836	No alias	transcription factor (ERF)	0.02	Archaeplastida
LOC_Os02g32140.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os02g38090.1	No alias	transcription factor (ERF)	0.06	Archaeplastida
LOC_Os11g06770.2	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os12g41060.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_10430769g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_10432141g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_132427g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_137148g0010	No alias	transcription factor (ERF)	0.06	Archaeplastida
MA_16778g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_214063g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_3758g0010	No alias	Ethylene-responsive transcription factor ERF013...	0.03	Archaeplastida
MA_411387g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
MA_500288g0010	No alias	transcription factor (DREB)	0.05	Archaeplastida
MA_54341g0010	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
MA_5730259g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_5979847g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_83118g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_8984558g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_9588449g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_9812198g0010	No alias	no hits & (original description: none)	0.04	Archaeplastida
MA_99821g0010	No alias	transcription factor (ERF)	0.04	Archaeplastida
Mp5g06970.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Mp7g09350.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Mp7g13760.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Pp3c11_23290V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c16_13280V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c1_5010V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c21_13130V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c27_6030V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c4_2530V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c5_810V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c6_16660V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c6_19350V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Smo104980	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
Solyc01g067540.2.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc01g090345.1.1	No alias	Ethylene-responsive transcription factor 13...	0.03	Archaeplastida
Solyc01g091760.3.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.05	Archaeplastida
Solyc02g067020.1.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Solyc02g077360.1.1	No alias	transcription factor (ERF)	0.07	Archaeplastida
Solyc03g117230.1.1	No alias	Ethylene-responsive transcription factor ERF084...	0.04	Archaeplastida
Solyc04g071770.3.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc04g072300.1.1	No alias	Ethylene-responsive transcription factor FZP OS=Oryza...	0.03	Archaeplastida
Solyc04g080910.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc05g051200.1.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Solyc05g052030.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc06g051840.1.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc06g063070.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc06g068360.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc09g091950.1.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Solyc11g006050.1.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc12g042210.2.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e003579_P001	No alias	Ethylene-responsive transcription factor ERF015...	0.02	Archaeplastida
Zm00001e007350_P001	No alias	no hits & (original description: none)	0.06	Archaeplastida
Zm00001e014659_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e015314_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e015429_P001	No alias	transcription factor (DREB)	0.05	Archaeplastida
Zm00001e019159_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e022864_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e023224_P001	No alias	transcription factor (DREB)	0.06	Archaeplastida
Zm00001e023759_P001	No alias	Ethylene-responsive transcription factor ERF017...	0.02	Archaeplastida
Zm00001e023804_P001	No alias	Ethylene-responsive transcription factor ERF013...	0.02	Archaeplastida
Zm00001e023816_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e026192_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e030585_P001	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
Zm00001e031497_P001	No alias	Ethylene-responsive transcription factor ABI4 OS=Oryza...	0.03	Archaeplastida
Zm00001e032032_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e035811_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e036130_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e037241_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e037404_P001	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
Zm00001e039555_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e041288_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e041815_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004556	alpha-amylase activity	IEP	Neighborhood
MF	GO:0004650	polygalacturonase activity	IEP	Neighborhood
MF	GO:0004857	enzyme inhibitor activity	IEP	Neighborhood
MF	GO:0004866	endopeptidase inhibitor activity	IEP	Neighborhood
MF	GO:0004867	serine-type endopeptidase inhibitor activity	IEP	Neighborhood
MF	GO:0004869	cysteine-type endopeptidase inhibitor activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
MF	GO:0005509	calcium ion binding	IEP	Neighborhood
BP	GO:0005975	carbohydrate metabolic process	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0006952	defense response	IEP	Neighborhood
BP	GO:0009116	nucleoside metabolic process	IEP	Neighborhood
BP	GO:0009611	response to wounding	IEP	Neighborhood
MF	GO:0016160	amylase activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0030234	enzyme regulator activity	IEP	Neighborhood
MF	GO:0030414	peptidase inhibitor activity	IEP	Neighborhood
MF	GO:0042910	xenobiotic transmembrane transporter activity	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0061134	peptidase regulator activity	IEP	Neighborhood
MF	GO:0061135	endopeptidase regulator activity	IEP	Neighborhood
MF	GO:0098772	molecular function regulator	IEP	Neighborhood
BP	GO:1901657	glycosyl compound metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	124	175

External Links

No external refs found!

LOC_Os05g49010.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation