Description : component RPL18a of LSU proteome component
Gene families : OG0001762 (Archaeplastida) Phylogenetic Tree(s): OG0001762_tree ,
OG_05_0001750 (LandPlants) Phylogenetic Tree(s): OG_05_0001750_tree ,
OG_06_0001973 (SeedPlants) Phylogenetic Tree(s): OG_06_0001973_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os05g49030.1 | |
Cluster | HCCA: Cluster_140 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00001p00102800 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.05 | Archaeplastida | |
AMTR_s00003p00234980 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.18 | Archaeplastida | |
AT1G29965 | No alias | Ribosomal protein L18ae/LX family protein | 0.07 | Archaeplastida | |
AT2G34480 | No alias | Ribosomal protein L18ae/LX family protein | 0.35 | Archaeplastida | |
AT3G14600 | No alias | Ribosomal protein L18ae/LX family protein | 0.27 | Archaeplastida | |
Cpa|evm.model.tig00000615.59 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.21 | Archaeplastida | |
Cre01.g047750 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.34 | Archaeplastida | |
GSVIVT01000485001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.16 | Archaeplastida | |
GSVIVT01021430001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.14 | Archaeplastida | |
GSVIVT01021433001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.16 | Archaeplastida | |
Gb_05341 | No alias | component RPL18a of LSU proteome component | 0.06 | Archaeplastida | |
MA_12029g0010 | No alias | component RPL18a of LSU proteome component | 0.2 | Archaeplastida | |
Mp1g17730.1 | No alias | component RPL18a of LSU proteome component | 0.33 | Archaeplastida | |
Pp3c12_7770V3.1 | No alias | Ribosomal protein L18ae/LX family protein | 0.21 | Archaeplastida | |
Pp3c13_12320V3.1 | No alias | Ribosomal protein L18ae/LX family protein | 0.02 | Archaeplastida | |
Pp3c20_15150V3.1 | No alias | Ribosomal protein L18ae/LX family protein | 0.14 | Archaeplastida | |
Pp3c3_11250V3.1 | No alias | Ribosomal protein L18ae/LX family protein | 0.23 | Archaeplastida | |
Pp3c8_13880V3.1 | No alias | Ribosomal protein L18ae/LX family protein | 0.14 | Archaeplastida | |
Smo227198 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.11 | Archaeplastida | |
Solyc02g070640.3.1 | No alias | component RPL18a of LSU proteome component | 0.14 | Archaeplastida | |
Solyc02g070650.2.1 | No alias | component RPL18a of LSU proteome component | 0.09 | Archaeplastida | |
Solyc06g065590.4.1 | No alias | component RPL18a of LSU proteome component | 0.15 | Archaeplastida | |
Solyc08g016180.3.1 | No alias | component RPL18a of LSU proteome component | 0.26 | Archaeplastida | |
Zm00001e020218_P001 | No alias | component RPL18a of LSU proteome component | 0.15 | Archaeplastida | |
Zm00001e026540_P001 | No alias | component RPL18a of LSU proteome component | 0.24 | Archaeplastida | |
Zm00001e028015_P002 | No alias | component RPL18a of LSU proteome component | 0.21 | Archaeplastida | |
Zm00001e032436_P001 | No alias | component RPL18a of LSU proteome component | 0.26 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0003746 | translation elongation factor activity | IEP | Neighborhood |
BP | GO:0006400 | tRNA modification | IEP | Neighborhood |
BP | GO:0006414 | translational elongation | IEP | Neighborhood |
BP | GO:0006448 | regulation of translational elongation | IEP | Neighborhood |
BP | GO:0006449 | regulation of translational termination | IEP | Neighborhood |
MF | GO:0008097 | 5S rRNA binding | IEP | Neighborhood |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Neighborhood |
MF | GO:0008173 | RNA methyltransferase activity | IEP | Neighborhood |
MF | GO:0008175 | tRNA methyltransferase activity | IEP | Neighborhood |
MF | GO:0008176 | tRNA (guanine-N7-)-methyltransferase activity | IEP | Neighborhood |
BP | GO:0009891 | positive regulation of biosynthetic process | IEP | Neighborhood |
BP | GO:0009893 | positive regulation of metabolic process | IEP | Neighborhood |
BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0010628 | positive regulation of gene expression | IEP | Neighborhood |
CC | GO:0015934 | large ribosomal subunit | IEP | Neighborhood |
MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Neighborhood |
MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | Neighborhood |
BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | Neighborhood |
BP | GO:0032270 | positive regulation of cellular protein metabolic process | IEP | Neighborhood |
BP | GO:0034250 | positive regulation of cellular amide metabolic process | IEP | Neighborhood |
BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Neighborhood |
MF | GO:0043022 | ribosome binding | IEP | Neighborhood |
BP | GO:0043243 | positive regulation of protein complex disassembly | IEP | Neighborhood |
BP | GO:0043244 | regulation of protein complex disassembly | IEP | Neighborhood |
BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
CC | GO:0044391 | ribosomal subunit | IEP | Neighborhood |
MF | GO:0044877 | protein-containing complex binding | IEP | Neighborhood |
BP | GO:0045727 | positive regulation of translation | IEP | Neighborhood |
BP | GO:0045901 | positive regulation of translational elongation | IEP | Neighborhood |
BP | GO:0045905 | positive regulation of translational termination | IEP | Neighborhood |
BP | GO:0048522 | positive regulation of cellular process | IEP | Neighborhood |
BP | GO:0051128 | regulation of cellular component organization | IEP | Neighborhood |
BP | GO:0051130 | positive regulation of cellular component organization | IEP | Neighborhood |
BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0051247 | positive regulation of protein metabolic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR023573 | Ribosomal_L18a//L18Ae/LX | 7 | 128 |
No external refs found! |