AMTR_s00006p00267180 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00006.297

Description : AAA-ATPase At3g28540 OS=Arabidopsis thaliana

Gene families : OG0000095 (Archaeplastida) Phylogenetic Tree(s): OG0000095_tree ,
OG_05_0000059 (LandPlants) Phylogenetic Tree(s): OG_05_0000059_tree ,
OG_06_0000488 (SeedPlants) Phylogenetic Tree(s): OG_06_0000488_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00006p00267180
Cluster	HCCA: Cluster_33

Target	Alias	Description	ECC score	Gene Family Method
AT3G28520	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.03	Archaeplastida
AT3G28540	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	Archaeplastida
AT4G05340	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	Archaeplastida
AT5G40010	AATP1	AAA-ATPase 1	0.03	Archaeplastida
GSVIVT01001352001	No alias	AAA-ATPase At4g30250 OS=Arabidopsis thaliana	0.02	Archaeplastida
GSVIVT01008088001	No alias	AAA-ATPase At3g28540 OS=Arabidopsis thaliana	0.04	Archaeplastida
GSVIVT01018890001	No alias	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana	0.05	Archaeplastida
GSVIVT01032553001	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana	0.03	Archaeplastida
LOC_Os01g45450.1	No alias	AAA-ATPase At5g17740 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os03g58800.1	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os12g28137.1	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.02	Archaeplastida
LOC_Os12g28177.1	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.02	Archaeplastida
LOC_Os12g28550.1	No alias	AAA-ATPase At5g40000 OS=Arabidopsis thaliana...	0.03	Archaeplastida
LOC_Os12g44190.1	No alias	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_10111030g0010	No alias	AAA-ATPase At3g28580 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_10285593g0010	No alias	AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_10435468g0010	No alias	AAA-ATPase At3g28510 OS=Arabidopsis thaliana...	0.02	Archaeplastida
MA_178867g0010	No alias	AAA-ATPase At4g25835 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_230170g0010	No alias	AAA-ATPase At5g57480 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_5260g0010	No alias	AAA-ATPase At3g28510 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_56516g0010	No alias	AAA-ATPase At3g28570, mitochondrial OS=Arabidopsis...	0.03	Archaeplastida
Pp3c1_35610V3.1	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	Archaeplastida
Pp3c8_710V3.1	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.01	Archaeplastida
Smo75451	No alias	AAA-ATPase At3g28600 OS=Arabidopsis thaliana	0.02	Archaeplastida
Solyc03g033790.4.1	No alias	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.04	Archaeplastida
Solyc03g033840.4.1	No alias	Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis...	0.02	Archaeplastida
Zm00001e013138_P001	No alias	AAA-ATPase At5g57480 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Zm00001e027961_P001	No alias	AAA-ATPase At3g50940 OS=Arabidopsis thaliana...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Neighborhood
BP	GO:0006631	fatty acid metabolic process	IEP	Neighborhood
BP	GO:0006633	fatty acid biosynthetic process	IEP	Neighborhood
MF	GO:0008234	cysteine-type peptidase activity	IEP	Neighborhood
BP	GO:0008610	lipid biosynthetic process	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
BP	GO:0016053	organic acid biosynthetic process	IEP	Neighborhood
MF	GO:0016462	pyrophosphatase activity	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Neighborhood
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Neighborhood
MF	GO:0016887	ATPase activity	IEP	Neighborhood
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Neighborhood
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Neighborhood
BP	GO:0044255	cellular lipid metabolic process	IEP	Neighborhood
BP	GO:0044283	small molecule biosynthetic process	IEP	Neighborhood
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Neighborhood
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Neighborhood
MF	GO:0080019	fatty-acyl-CoA reductase (alcohol-forming) activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR025753	AAA_N_dom	23	119
IPR003959	ATPase_AAA_core	197	334

External Links

No external refs found!

AMTR_s00006p00267180 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation