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  5. AMTR_s00006p00267240

AMTR_s00006p00267240 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00006.298

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0014959 (SeedPlants) Phylogenetic Tree(s): OG_06_0014959_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00006p00267240
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00219710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00006p00225600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00010p00264600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00010p00267100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
AMTR_s00024p00224470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00032p00221670 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00068p00092800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
AMTR_s00119p00105590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s01267p00006490 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT1G14350 AtMYB124, MYB124, FLP Duplicated homeodomain-like superfamily protein 0.02 Archaeplastida
AT1G18570 AtMYB51, BW51B,... myb domain protein 51 0.05 Archaeplastida
AT1G22640 MYB3, ATMYB3 myb domain protein 3 0.03 Archaeplastida
AT1G35515 MYB8, HOS10 high response to osmotic stress 10 0.04 Archaeplastida
AT2G47460 ATMYB12, PFG1, MYB12 myb domain protein 12 0.06 Archaeplastida
AT3G02940 AtMYB107, MYB107 myb domain protein 107 0.03 Archaeplastida
AT3G06490 BOS1, AtMYB108, MYB108 myb domain protein 108 0.03 Archaeplastida
AT3G09370 MYB3R-3, AtMYB3R3 myb domain protein 3r-3 0.03 Archaeplastida
AT3G27810 ATMYB21, MYB21, ATMYB3 myb domain protein 21 0.02 Archaeplastida
AT3G46130 ATMYB48-1,... myb domain protein 48 0.03 Archaeplastida
AT4G09460 MYB6, AtMYB6 myb domain protein 6 0.03 Archaeplastida
AT4G17785 MYB39 myb domain protein 39 0.02 Archaeplastida
AT4G18770 AtMYB98, MYB98 myb domain protein 98 0.03 Archaeplastida
AT5G14340 AtMYB40, MYB40 myb domain protein 40 0.03 Archaeplastida
AT5G16600 MYB43, AtMYB43 myb domain protein 43 0.06 Archaeplastida
AT5G40350 MYB24, AtMYB24 myb domain protein 24 0.02 Archaeplastida
AT5G40360 MYB115, AtMYB115 myb domain protein 115 0.02 Archaeplastida
AT5G49330 PFG3, ATMYB111, MYB111 myb domain protein 111 0.04 Archaeplastida
AT5G52260 MYB19, AtMYB19 myb domain protein 19 0.06 Archaeplastida
GSVIVT01007981001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01008090001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01008484001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01011447001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01011872001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01012778001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.1 Archaeplastida
GSVIVT01015370001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01017716001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01018577001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01018745001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01020038001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01025034001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01027949001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.08 Archaeplastida
GSVIVT01028981001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01028984001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01032452001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
Gb_02020 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_02423 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_03227 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_11232 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_11536 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_15814 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_22239 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_22885 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_26833 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_29520 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_29789 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_34086 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_34464 No alias Transcription factor GAMYB OS=Oryza sativa subsp.... 0.02 Archaeplastida
Gb_39852 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g03720.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g16810.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g74410.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os03g19120.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os03g51110.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os04g38740.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os04g50680.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os04g50770.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g49310.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os06g02250.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os06g40330.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os06g43090.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os07g04700.1 No alias component SNAPC4 of SNAP snRNA transcription factor... 0.02 Archaeplastida
LOC_Os07g48870.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os08g05520.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os08g37970.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os09g23620.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os11g10130.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os11g47460.1 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10426901g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_10426901g0020 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10427849g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_10428459g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_10430220g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_12445g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_124887g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_1261g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_128244g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_130918g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_136123g0010 No alias transcription factor (MYB) 0.07 Archaeplastida
MA_158319g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_21440g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_223201g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_278282g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_30848g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_308669g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_323706g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_446064g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_53373g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_6285g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_6393g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_7105735g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_8147g0020 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_81763g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_89683g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_9476g0040 No alias Transcription factor MYB3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_95534g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_97537g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9818613g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
Mp1g09420.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Mp1g17210.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Mp3g07510.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Pp3c11_5410V3.1 No alias myb domain protein 16 0.02 Archaeplastida
Pp3c16_9970V3.1 No alias myb domain protein 106 0.01 Archaeplastida
Pp3c17_7730V3.1 No alias myb domain protein 55 0.01 Archaeplastida
Pp3c18_340V3.1 No alias myb domain protein 105 0.01 Archaeplastida
Pp3c1_21610V3.1 No alias myb domain protein 103 0.01 Archaeplastida
Pp3c1_4970V3.1 No alias myb domain protein 106 0.01 Archaeplastida
Pp3c25_3170V3.1 No alias myb domain protein 16 0.03 Archaeplastida
Pp3c6_24650V3.1 No alias myb domain protein 109 0.02 Archaeplastida
Pp3c6_9970V3.1 No alias myb domain protein 106 0.01 Archaeplastida
Pp3c7_21220V3.1 No alias myb domain protein 105 0.04 Archaeplastida
Pp3c7_23450V3.1 No alias myb domain protein 106 0.04 Archaeplastida
Pp3c9_24170V3.1 No alias myb domain protein 33 0.03 Archaeplastida
Smo98669 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc01g111500.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc02g067760.4.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc02g079280.3.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc02g086690.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g093930.4.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc03g116100.3.1 No alias transcription factor (MYB) 0.07 Archaeplastida
Solyc03g121740.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g056310.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g074170.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g007870.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g008250.2.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc05g014290.4.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc05g048830.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc05g053150.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc06g069850.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc06g075660.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc06g076840.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc07g054840.4.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc07g055000.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc08g076700.1.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc09g008250.4.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc10g005760.3.1 No alias transcription factor (MYB). transcriptional key... 0.02 Archaeplastida
Solyc10g008700.3.1 No alias No annotation 0.03 Archaeplastida
Solyc10g055410.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc11g011050.2.1 No alias transcription factor (MYB) 0.17 Archaeplastida
Solyc12g099130.2.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e002893_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e004128_P003 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e004140_P002 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e005507_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e005823_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e007085_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e009831_P001 No alias transcription factor (MYB) 0.07 Archaeplastida
Zm00001e009849_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e011944_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e013452_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e017428_P003 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e018186_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e018193_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e019941_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e020044_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e020371_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e020993_P002 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e022450_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e024682_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e028135_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e029816_P001 No alias transcription factor (MYB) 0.01 Archaeplastida
Zm00001e032298_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e034118_P001 No alias transcription factor (MYB) 0.07 Archaeplastida
Zm00001e034214_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e035025_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e035993_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e038356_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e040384_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e041239_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e041547_P001 No alias transcription factor (MYB) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 52 97
No external refs found!