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  5. LOC_Os05g50490.3

LOC_Os05g50490.3


Description : Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana (sp|q9m069|e137_arath : 85.9)


Gene families : OG0000145 (Archaeplastida) Phylogenetic Tree(s): OG0000145_tree ,
OG_05_0000072 (LandPlants) Phylogenetic Tree(s): OG_05_0000072_tree ,
OG_06_0000086 (SeedPlants) Phylogenetic Tree(s): OG_06_0000086_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g50490.3
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AT1G09460 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 Archaeplastida
AT1G26450 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 Archaeplastida
AT1G69295 PDCB4 plasmodesmata callose-binding protein 4 0.06 Archaeplastida
AT2G30933 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 Archaeplastida
AT4G13600 No alias Carbohydrate-binding X8 domain superfamily protein 0.04 Archaeplastida
AT5G63240 No alias Carbohydrate-binding X8 domain superfamily protein 0.02 Archaeplastida
LOC_Os01g44090.1 No alias Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis... 0.04 Archaeplastida
Pp3c21_14040V3.1 No alias O-Glycosyl hydrolases family 17 protein 0.03 Archaeplastida
Smo29014 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc01g005830.4.1 No alias Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis... 0.03 Archaeplastida
Solyc01g010310.4.1 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 Archaeplastida
Solyc01g101120.4.1 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.05 Archaeplastida
Solyc12g017360.3.1 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.04 Archaeplastida
Solyc12g098410.2.1 No alias PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e020392_P001 No alias Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
InterPro domains Description Start Stop
IPR012946 X8 109 178
No external refs found!