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  5. LOC_Os05g50550.1

LOC_Os05g50550.1


Description : solanesyl diphosphate synthase (SPS1/2)


Gene families : OG0004744 (Archaeplastida) Phylogenetic Tree(s): OG0004744_tree ,
OG_05_0004400 (LandPlants) Phylogenetic Tree(s): OG_05_0004400_tree ,
OG_06_0004890 (SeedPlants) Phylogenetic Tree(s): OG_06_0004890_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g50550.1
Cluster HCCA: Cluster_321

Target Alias Description ECC score Gene Family Method Actions
AT1G17050 SPS2 solanesyl diphosphate synthase 2 0.14 Archaeplastida
AT1G78510 SPS1 solanesyl diphosphate synthase 1 0.15 Archaeplastida
Cre13.g565650 No alias Coenzyme metabolism.prenylquinone synthesis.ubiquinone... 0.05 Archaeplastida
GSVIVT01014066001 No alias Coenzyme metabolism.prenylquinone synthesis.ubiquinone... 0.12 Archaeplastida
Gb_34726 No alias solanesyl diphosphate synthase (SPS1/2) 0.05 Archaeplastida
MA_17853g0010 No alias solanesyl diphosphate synthase (SPS1/2) 0.06 Archaeplastida
Mp5g20580.1 No alias solanesyl diphosphate synthase (SPS1/2) 0.05 Archaeplastida
Pp3c16_16550V3.1 No alias solanesyl diphosphate synthase 1 0.08 Archaeplastida
Pp3c27_1880V3.1 No alias solanesyl diphosphate synthase 1 0.08 Archaeplastida
Smo177791 No alias Coenzyme metabolism.prenylquinone synthesis.ubiquinone... 0.08 Archaeplastida
Solyc07g061990.3.1 No alias solanesyl diphosphate synthase (SPS1/2) 0.04 Archaeplastida
Zm00001e000405_P004 No alias solanesyl diphosphate synthase (SPS1/2) 0.11 Archaeplastida
Zm00001e032549_P002 No alias solanesyl diphosphate synthase (SPS1/2) 0.09 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0008299 isoprenoid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001505 regulation of neurotransmitter levels IEP Neighborhood
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP Neighborhood
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Neighborhood
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006544 glycine metabolic process IEP Neighborhood
BP GO:0006546 glycine catabolic process IEP Neighborhood
BP GO:0006817 phosphate ion transport IEP Neighborhood
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009071 serine family amino acid catabolic process IEP Neighborhood
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Neighborhood
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Neighborhood
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Neighborhood
BP GO:0042133 neurotransmitter metabolic process IEP Neighborhood
BP GO:0042135 neurotransmitter catabolic process IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Neighborhood
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Neighborhood
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Neighborhood
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
MF GO:2001070 starch binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 110 354
No external refs found!