LOC_Os05g50610.1

Description : transcription factor (WRKY)

Gene families : OG0000007 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000005 (LandPlants) Phylogenetic Tree(s): OG_05_0000005_tree ,
OG_06_0012467 (SeedPlants) Phylogenetic Tree(s): OG_06_0012467_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os05g50610.1
Cluster	HCCA: Cluster_95

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00065p00201830	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AMTR_s00130p00044000	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.05	Archaeplastida
AMTR_s00156p00038330	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	Archaeplastida
AT1G30650	WRKY14, AR411, ATWRKY14	WRKY DNA-binding protein 14	0.03	Archaeplastida
AT1G66560	ATWRKY64, WRKY64	WRKY DNA-binding protein 64	0.03	Archaeplastida
AT2G04880	WRKY1, ZAP1, ATWRKY1	zinc-dependent activator protein-1	0.02	Archaeplastida
AT2G24570	WRKY17, ATWRKY17	WRKY DNA-binding protein 17	0.02	Archaeplastida
AT2G25000	ATWRKY60, WRKY60	WRKY DNA-binding protein 60	0.03	Archaeplastida
AT2G30250	ATWRKY25, WRKY25	WRKY DNA-binding protein 25	0.04	Archaeplastida
AT3G01970	ATWRKY45, WRKY45	WRKY DNA-binding protein 45	0.03	Archaeplastida
AT4G18170	WRKY28, ATWRKY28	WRKY DNA-binding protein 28	0.04	Archaeplastida
AT4G23810	WRKY53, ATWRKY53	WRKY family transcription factor	0.03	Archaeplastida
AT4G31550	ATWRKY11, WRKY11	WRKY DNA-binding protein 11	0.03	Archaeplastida
AT5G13080	WRKY75, ATWRKY75	WRKY DNA-binding protein 75	0.03	Archaeplastida
AT5G15130	WRKY72, ATWRKY72	WRKY DNA-binding protein 72	0.03	Archaeplastida
AT5G22570	WRKY38, ATWRKY38	WRKY DNA-binding protein 38	0.03	Archaeplastida
AT5G26170	ATWRKY50, WRKY50	WRKY DNA-binding protein 50	0.02	Archaeplastida
GSVIVT01021252001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
GSVIVT01021397001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
GSVIVT01026969001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.02	Archaeplastida
GSVIVT01028129001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
GSVIVT01035884001	No alias	RNA biosynthesis.transcriptional activation.WRKY...	0.04	Archaeplastida
Gb_16917	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Gb_26894	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Gb_40207	No alias	transcription factor (WRKY)	0.02	Archaeplastida
LOC_Os01g53260.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
LOC_Os11g29870.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
MA_103616g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_134559g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_2290g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_47052g0010	No alias	transcription factor (WRKY)	0.03	Archaeplastida
MA_47307g0010	No alias	transcription factor (WRKY)	0.02	Archaeplastida
MA_6918834g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_9394894g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
Mp6g16800.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Pp3c21_11270V3.1	No alias	WRKY DNA-binding protein 28	0.02	Archaeplastida
Pp3c7_7550V3.1	No alias	WRKY DNA-binding protein 11	0.02	Archaeplastida
Solyc01g079260.4.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
Solyc01g079360.4.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc01g095100.4.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc02g032950.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc04g051690.4.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc04g078550.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc05g015850.4.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc06g068460.3.1	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Solyc07g056280.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc08g067340.4.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc08g067360.3.1	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Solyc09g010960.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc10g007970.2.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Solyc10g009550.3.1	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e005078_P002	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e005626_P001	No alias	No annotation	0.05	Archaeplastida
Zm00001e016622_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e019418_P001	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.03	Archaeplastida
Zm00001e019827_P003	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e019908_P001	No alias	transcription factor (WRKY)	0.04	Archaeplastida
Zm00001e024807_P002	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e027301_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e027911_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e028011_P002	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e037631_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e040369_P001	No alias	transcription factor (WRKY)	0.02	Archaeplastida
Zm00001e041561_P001	No alias	transcription factor (WRKY)	0.03	Archaeplastida
Zm00001e042185_P001	No alias	transcription factor (WRKY). transcription factor (WRKY33)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004497	monooxygenase activity	IEP	Neighborhood
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	Neighborhood
MF	GO:0004834	tryptophan synthase activity	IEP	Neighborhood
MF	GO:0005516	calmodulin binding	IEP	Neighborhood
CC	GO:0005667	transcription factor complex	IEP	Neighborhood
CC	GO:0005672	transcription factor TFIIA complex	IEP	Neighborhood
BP	GO:0006082	organic acid metabolic process	IEP	Neighborhood
BP	GO:0006352	DNA-templated transcription, initiation	IEP	Neighborhood
BP	GO:0006367	transcription initiation from RNA polymerase II promoter	IEP	Neighborhood
BP	GO:0006568	tryptophan metabolic process	IEP	Neighborhood
BP	GO:0006576	cellular biogenic amine metabolic process	IEP	Neighborhood
BP	GO:0006586	indolalkylamine metabolic process	IEP	Neighborhood
BP	GO:0006633	fatty acid biosynthetic process	IEP	Neighborhood
BP	GO:0009072	aromatic amino acid family metabolic process	IEP	Neighborhood
BP	GO:0009308	amine metabolic process	IEP	Neighborhood
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Neighborhood
MF	GO:0016836	hydro-lyase activity	IEP	Neighborhood
BP	GO:0019752	carboxylic acid metabolic process	IEP	Neighborhood
BP	GO:0042430	indole-containing compound metabolic process	IEP	Neighborhood
BP	GO:0043436	oxoacid metabolic process	IEP	Neighborhood
BP	GO:0044106	cellular amine metabolic process	IEP	Neighborhood
CC	GO:0044451	nucleoplasm part	IEP	Neighborhood
CC	GO:0044798	nuclear transcription factor complex	IEP	Neighborhood
MF	GO:0050661	NADP binding	IEP	Neighborhood
CC	GO:0090575	RNA polymerase II transcription factor complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	188	244

External Links

No external refs found!

LOC_Os05g50610.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation