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  5. LOC_Os05g50920.1

LOC_Os05g50920.1


Description : gamma-aminobutyric acid transporter (GAT)


Gene families : OG0001908 (Archaeplastida) Phylogenetic Tree(s): OG0001908_tree ,
OG_05_0001249 (LandPlants) Phylogenetic Tree(s): OG_05_0001249_tree ,
OG_06_0006782 (SeedPlants) Phylogenetic Tree(s): OG_06_0006782_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g50920.1
Cluster HCCA: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01034729001 No alias Solute transport.carrier-mediated transport.APC... 0.06 Archaeplastida
Gb_16077 No alias gamma-aminobutyric acid transporter (GAT) 0.04 Archaeplastida
Gb_39427 No alias gamma-aminobutyric acid transporter (GAT) 0.03 Archaeplastida
Gb_41065 No alias gamma-aminobutyric acid transporter (GAT) 0.02 Archaeplastida
Mp5g14240.1 No alias gamma-aminobutyric acid transporter (GAT) 0.02 Archaeplastida
Solyc11g066800.2.1 No alias gamma-aminobutyric acid transporter (GAT) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015689 molybdate ion transport IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 57 463
No external refs found!