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  5. LOC_Os05g51550.1

LOC_Os05g51550.1


Description : Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana (sp|f4j7t2|eaf1b_arath : 142.0)


Gene families : OG0002496 (Archaeplastida) Phylogenetic Tree(s): OG0002496_tree ,
OG_05_0002072 (LandPlants) Phylogenetic Tree(s): OG_05_0002072_tree ,
OG_06_0003303 (SeedPlants) Phylogenetic Tree(s): OG_06_0003303_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g51550.1
Cluster HCCA: Cluster_219

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00026940 evm_27.TU.AmTr_v1... Chromatin modification-related protein EAF1 A... 0.04 Archaeplastida
AMTR_s00045p00028830 evm_27.TU.AmTr_v1... Chromatin modification-related protein EAF1 B... 0.05 Archaeplastida
AT3G24870 No alias Helicase/SANT-associated, DNA binding protein 0.03 Archaeplastida
AT3G24880 No alias Helicase/SANT-associated, DNA binding protein 0.04 Archaeplastida
GSVIVT01028685001 No alias Chromatin modification-related protein EAF1 A... 0.05 Archaeplastida
Gb_03424 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.08 Archaeplastida
Gb_31226 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.1 Archaeplastida
MA_31176g0010 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.07 Archaeplastida
MA_79062g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
Mp2g02900.1 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.1 Archaeplastida
Pp3c26_13270V3.1 No alias Helicase/SANT-associated, DNA binding protein 0.09 Archaeplastida
Pp3c26_13460V3.1 No alias Helicase/SANT-associated, DNA binding protein 0.09 Archaeplastida
Pp3c26_13463V3.1 No alias Helicase/SANT-associated, DNA binding protein 0.07 Archaeplastida
Pp3c4_31630V3.1 No alias Helicase/SANT-associated, DNA binding protein 0.07 Archaeplastida
Pp3c7_10800V3.1 No alias Helicase/SANT-associated, DNA binding protein 0.11 Archaeplastida
Smo424802 No alias Chromatin modification-related protein EAF1 B... 0.04 Archaeplastida
Solyc06g083420.3.1 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.02 Archaeplastida
Solyc09g060080.4.1 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.03 Archaeplastida
Zm00001e020520_P002 No alias component EAF1 of NuA4 histone acetyltransferase complex 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
MF GO:0017056 structural constituent of nuclear pore IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!