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  5. LOC_Os05g51650.1

LOC_Os05g51650.1


Description : component LSm8 of U6-associated LSm accessory ribonucleoprotein complex


Gene families : OG0006043 (Archaeplastida) Phylogenetic Tree(s): OG0006043_tree ,
OG_05_0007890 (LandPlants) Phylogenetic Tree(s): OG_05_0007890_tree ,
OG_06_0007569 (SeedPlants) Phylogenetic Tree(s): OG_06_0007569_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g51650.1
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Cre02.g142850 No alias RNA processing.RNA splicing.U6-associated LSm accessory... 0.02 Archaeplastida
GSVIVT01024237001 No alias RNA processing.RNA splicing.U6-associated LSm accessory... 0.05 Archaeplastida
Pp3c5_26940V3.1 No alias Small nuclear ribonucleoprotein family protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 8 116
No external refs found!