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  5. LOC_Os05g51660.1

LOC_Os05g51660.1


Description : Pathogenesis-related protein 1B OS=Nicotiana tabacum (sp|p07053|pr1b_tobac : 96.7)


Gene families : OG0000081 (Archaeplastida) Phylogenetic Tree(s): OG0000081_tree ,
OG_05_0017789 (LandPlants) Phylogenetic Tree(s): OG_05_0017789_tree ,
OG_06_0017326 (SeedPlants) Phylogenetic Tree(s): OG_06_0017326_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os05g51660.1
Cluster HCCA: Cluster_274

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00244110 evm_27.TU.AmTr_v1... Pathogenesis-related protein PR-1 OS=Medicago truncatula 0.06 Archaeplastida
AT1G01310 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Archaeplastida
AT3G09590 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Archaeplastida
AT3G19690 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Archaeplastida
AT4G25780 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Archaeplastida
AT5G02730 No alias CAP (Cysteine-rich secretory proteins, Antigen 5, and... 0.03 Archaeplastida
Gb_11042 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 Archaeplastida
LOC_Os12g43700.1 No alias Pathogenesis-related protein PR-1 OS=Medicago truncatula... 0.03 Archaeplastida
MA_150049g0010 No alias Basic form of pathogenesis-related protein 1... 0.03 Archaeplastida
Solyc01g106600.2.1 No alias Basic form of pathogenesis-related protein 1... 0.05 Archaeplastida
Solyc08g068990.2.1 No alias Pathogenesis-related protein 1C OS=Nicotiana tabacum... 0.03 Archaeplastida
Zm00001e026690_P001 No alias Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.08 Archaeplastida
Zm00001e032607_P001 No alias Pathogenesis-related protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
MF GO:0030570 pectate lyase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR014044 CAP_domain 61 183
No external refs found!