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  5. LOC_Os06g01670.1

LOC_Os06g01670.1


Description : transcription factor (MYB-related). REVEILLE circadian clock factor


Gene families : OG0000637 (Archaeplastida) Phylogenetic Tree(s): OG0000637_tree ,
OG_05_0000630 (LandPlants) Phylogenetic Tree(s): OG_05_0000630_tree ,
OG_06_0000581 (SeedPlants) Phylogenetic Tree(s): OG_06_0000581_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g01670.1
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AT3G09600 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
AT4G01280 No alias Homeodomain-like superfamily protein 0.05 Archaeplastida
AT5G17300 RVE1 Homeodomain-like superfamily protein 0.03 Archaeplastida
GSVIVT01027456001 No alias Multi-process regulation.circadian clock.core oscillator... 0.04 Archaeplastida
Pp3c3_33220V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c4_2590V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Smo78045 No alias Multi-process regulation.circadian clock.evening element... 0.03 Archaeplastida
Solyc03g098320.4.1 No alias transcription factor (MYB-related) 0.06 Archaeplastida
Solyc10g084370.3.1 No alias transcription factor (MYB-related). REVEILLE circadian... 0.04 Archaeplastida
Zm00001e006465_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e013333_P002 No alias transcription factor (MYB-related) 0.07 Archaeplastida
Zm00001e016853_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e023232_P002 No alias transcription factor (MYB-related). REVEILLE circadian... 0.11 Archaeplastida
Zm00001e037757_P001 No alias transcription factor (MYB-related). REVEILLE circadian... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
BP GO:0003333 amino acid transmembrane transport IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004559 alpha-mannosidase activity IEP Neighborhood
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
MF GO:0005548 phospholipid transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006865 amino acid transport IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015748 organophosphate ester transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
BP GO:0015914 phospholipid transport IEP Neighborhood
MF GO:0015923 mannosidase activity IEP Neighborhood
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0071586 CAAX-box protein processing IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0098656 anion transmembrane transport IEP Neighborhood
BP GO:1903825 organic acid transmembrane transport IEP Neighborhood
BP GO:1905039 carboxylic acid transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 40 84
No external refs found!