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  5. LOC_Os06g01934.1

LOC_Os06g01934.1


Description : transcription factor (BEL)


Gene families : OG0000236 (Archaeplastida) Phylogenetic Tree(s): OG0000236_tree ,
OG_05_0000141 (LandPlants) Phylogenetic Tree(s): OG_05_0000141_tree ,
OG_06_0001991 (SeedPlants) Phylogenetic Tree(s): OG_06_0001991_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g01934.1
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00173920 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AMTR_s00059p00164750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AT2G27220 BLH5 BEL1-like homeodomain 5 0.03 Archaeplastida
AT2G27990 BLH8, PNF BEL1-like homeodomain 8 0.03 Archaeplastida
AT4G32980 ATH1 homeobox gene 1 0.03 Archaeplastida
AT5G02030 VAN, BLH9, RPL,... POX (plant homeobox) family protein 0.04 Archaeplastida
Cpa|evm.model.tig00020927.63 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
GSVIVT01009633001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01019399001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01034073001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
GSVIVT01035361001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
GSVIVT01037575001 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
Gb_22513 No alias transcription factor (BEL) 0.03 Archaeplastida
Gb_23074 No alias transcription factor (BEL) 0.05 Archaeplastida
LOC_Os03g47730.1 No alias transcription factor (BEL) 0.04 Archaeplastida
LOC_Os10g39030.1 No alias transcription factor (BEL) 0.03 Archaeplastida
LOC_Os12g06340.1 No alias transcription factor (BEL) 0.05 Archaeplastida
Mp5g11060.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp8g18310.1 No alias transcription factor (BEL) 0.03 Archaeplastida
Pp3c13_7150V3.1 No alias BEL1-like homeodomain 6 0.02 Archaeplastida
Solyc02g065490.4.1 No alias transcription factor (BEL) 0.03 Archaeplastida
Solyc04g079830.2.1 No alias transcription factor (BEL) 0.02 Archaeplastida
Solyc08g065420.3.1 No alias transcription factor (BEL) 0.04 Archaeplastida
Solyc08g081400.4.1 No alias transcription factor (BEL) 0.02 Archaeplastida
Solyc11g069890.3.1 No alias transcription factor (BEL) 0.03 Archaeplastida
Zm00001e000177_P001 No alias transcription factor (BEL) 0.04 Archaeplastida
Zm00001e000495_P001 No alias transcription factor (BEL) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006563 POX_dom 107 234
IPR008422 Homeobox_KN_domain 312 351
No external refs found!