LOC_Os06g02980.1


Description : subunit epsilon of peripheral CF1 subcomplex of ATP synthase complex


Gene families : OG0004278 (Archaeplastida) Phylogenetic Tree(s): OG0004278_tree ,
OG_05_0003295 (LandPlants) Phylogenetic Tree(s): OG_05_0003295_tree ,
OG_06_0002841 (SeedPlants) Phylogenetic Tree(s): OG_06_0002841_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g02980.1
Cluster HCCA: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00184530 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.ATP synthase... 0.06 Archaeplastida
ATCG00470 ATPE ATP synthase epsilon chain 0.04 Archaeplastida
Gb_04062 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.02 Archaeplastida
Gb_11358 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.02 Archaeplastida
Gb_25936 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.02 Archaeplastida
LOC_Os01g58000.1 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.15 Archaeplastida
LOC_Os06g39756.1 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.14 Archaeplastida
LOC_Os12g19430.1 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.16 Archaeplastida
Smo137774 No alias Photosynthesis.photophosphorylation.ATP synthase... 0.07 Archaeplastida
Solyc00g500140.1.1 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.04 Archaeplastida
Solyc01g017220.2.1 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.02 Archaeplastida
Zm00001e003900_P001 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.08 Archaeplastida
Zm00001e042031_P001 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.08 Archaeplastida
Zm00001e042052_P001 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.08 Archaeplastida
Zm00001e042080_P001 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.08 Archaeplastida
Zm00001e042096_P001 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.08 Archaeplastida
Zm00001e042162_P001 No alias No annotation 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0015986 ATP synthesis coupled proton transport IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009539 photosystem II reaction center IEP Neighborhood
CC GO:0009579 thylakoid IEP Neighborhood
BP GO:0009767 photosynthetic electron transport chain IEP Neighborhood
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Neighborhood
BP GO:0010109 regulation of photosynthesis IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016168 chlorophyll binding IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0042548 regulation of photosynthesis, light reaction IEP Neighborhood
BP GO:0042549 photosystem II stabilization IEP Neighborhood
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR020546 ATP_synth_F1_dsu/esu_N 141 205
IPR000194 ATPase_F1/V1/A1_a/bsu_nucl-bd 2 67
IPR020547 ATP_synth_F1_dsu/esu_C 210 253
No external refs found!