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Description : Pentatricopeptide repeat-containing protein At5g08510 OS=Arabidopsis thaliana (sp|q9fnn7|pp371_arath : 432.0)
Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0009848 (LandPlants) Phylogenetic Tree(s): OG_05_0009848_tree ,
OG_06_0013960 (SeedPlants) Phylogenetic Tree(s): OG_06_0013960_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os06g03570.2 | |
| Cluster | HCCA: Cluster_171 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00062p00213230 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.02 | Archaeplastida | |
| GSVIVT01023345001 | No alias | Pentatricopeptide repeat-containing protein At4g33990... | 0.02 | Archaeplastida | |
| Gb_27891 | No alias | RNA editing factor (OTP86) | 0.02 | Archaeplastida | |
| LOC_Os06g02200.1 | No alias | RNA editing factor (CRR22) | 0.04 | Archaeplastida | |
| MA_20168g0010 | No alias | Pentatricopeptide repeat-containing protein At3g26782,... | 0.02 | Archaeplastida | |
| Solyc03g051780.3.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
| Solyc03g098420.3.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | Archaeplastida | |
| Solyc07g008890.3.1 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.03 | Archaeplastida | |
| Zm00001e002505_P001 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Zm00001e019482_P001 | No alias | Pentatricopeptide repeat-containing protein At5g48910... | 0.02 | Archaeplastida | |
| Zm00001e031660_P001 | No alias | Pentatricopeptide repeat-containing protein At4g14170... | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
| MF | GO:0005216 | ion channel activity | IEP | Neighborhood |
| MF | GO:0005244 | voltage-gated ion channel activity | IEP | Neighborhood |
| MF | GO:0005247 | voltage-gated chloride channel activity | IEP | Neighborhood |
| MF | GO:0005253 | anion channel activity | IEP | Neighborhood |
| MF | GO:0005254 | chloride channel activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005516 | calmodulin binding | IEP | Neighborhood |
| CC | GO:0005634 | nucleus | IEP | Neighborhood |
| BP | GO:0006325 | chromatin organization | IEP | Neighborhood |
| BP | GO:0006338 | chromatin remodeling | IEP | Neighborhood |
| BP | GO:0006820 | anion transport | IEP | Neighborhood |
| BP | GO:0006821 | chloride transport | IEP | Neighborhood |
| MF | GO:0008308 | voltage-gated anion channel activity | IEP | Neighborhood |
| MF | GO:0008509 | anion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | Neighborhood |
| MF | GO:0015108 | chloride transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0015698 | inorganic anion transport | IEP | Neighborhood |
| BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
| BP | GO:0016579 | protein deubiquitination | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Neighborhood |
| MF | GO:0022832 | voltage-gated channel activity | IEP | Neighborhood |
| MF | GO:0022836 | gated channel activity | IEP | Neighborhood |
| MF | GO:0022838 | substrate-specific channel activity | IEP | Neighborhood |
| MF | GO:0022839 | ion gated channel activity | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| MF | GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
| MF | GO:0043531 | ADP binding | IEP | Neighborhood |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Neighborhood |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:0097747 | RNA polymerase activity | IEP | Neighborhood |
| MF | GO:0101005 | ubiquitinyl hydrolase activity | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| No external refs found! |