LOC_Os06g04090.1

Description : transcription factor (NAC)

Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000015 (LandPlants) Phylogenetic Tree(s): OG_05_0000015_tree ,
OG_06_0000168 (SeedPlants) Phylogenetic Tree(s): OG_06_0000168_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os06g04090.1
Cluster	HCCA: Cluster_291

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00063550	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00017p00255350	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
AMTR_s00025p00174590	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00079p00099620	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
AMTR_s00092p00142980	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00119p00045570	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AT1G12260	EMB2749,...	NAC 007	0.03	Archaeplastida
AT1G32510	NAC011, ANAC011	NAC domain containing protein 11	0.02	Archaeplastida
AT1G32770	ANAC012, NST3,...	NAC domain containing protein 12	0.06	Archaeplastida
AT1G62700	VND5, ANAC026	Arabidopsis NAC domain containing protein 26	0.03	Archaeplastida
AT1G65910	anac028, NAC028	NAC domain containing protein 28	0.04	Archaeplastida
AT1G71930	ANAC030, VND7	vascular related NAC-domain protein 7	0.03	Archaeplastida
AT2G46770	NST1, ANAC043, EMB2301	NAC (No Apical Meristem) domain transcriptional...	0.06	Archaeplastida
AT3G04070	anac047, NAC047	NAC domain containing protein 47	0.03	Archaeplastida
AT3G10480	ANAC050, NAC050	NAC domain containing protein 50	0.04	Archaeplastida
AT3G15170	ANAC054, ATNAC1, CUC1	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
AT3G18400	anac058, NAC058	NAC domain containing protein 58	0.03	Archaeplastida
AT3G61910	NST2, NAC066, ANAC066	NAC domain protein 66	0.05	Archaeplastida
AT4G17980	anac071, NAC071	NAC domain containing protein 71	0.03	Archaeplastida
AT4G28530	anac074, NAC074	NAC domain containing protein 74	0.02	Archaeplastida
AT4G36160	VND2, NAC076, ANAC076	NAC domain containing protein 76	0.03	Archaeplastida
AT5G46590	anac096, NAC096	NAC domain containing protein 96	0.03	Archaeplastida
GSVIVT01008291001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
GSVIVT01014287001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.06	Archaeplastida
GSVIVT01018809001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01019670001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
GSVIVT01020834001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
GSVIVT01027431001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
GSVIVT01028354001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.06	Archaeplastida
GSVIVT01029392001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
GSVIVT01033374001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01035214001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01035554001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.06	Archaeplastida
Gb_01126	No alias	transcription factor (NAC)	0.05	Archaeplastida
Gb_01375	No alias	transcription factor (NAC)	0.04	Archaeplastida
Gb_13957	No alias	transcription factor (NAC)	0.09	Archaeplastida
Gb_20625	No alias	transcription factor (NAC)	0.03	Archaeplastida
Gb_20627	No alias	transcription factor (NAC)	0.05	Archaeplastida
Gb_27819	No alias	transcription factor (KNOX). transcription factor (NAC)	0.07	Archaeplastida
Gb_35309	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os11g29430.1	No alias	no hits & (original description: none)	0.05	Archaeplastida
MA_10430397g0010	No alias	transcription factor (NAC)	0.07	Archaeplastida
MA_109677g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_112054g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_137415g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_139896g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_33912g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
Pp3c3_25610V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
Pp3c3_8880V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Archaeplastida
Pp3c5_570V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Archaeplastida
Solyc02g084350.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc02g088180.3.1	No alias	transcription factor (NAC)	0.05	Archaeplastida
Solyc04g005610.3.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc06g073050.2.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc07g062840.3.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc08g006020.4.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc08g008660.4.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc10g055760.2.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc11g018660.2.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc12g036480.2.1	No alias	transcription factor (NAC)	0.07	Archaeplastida
Zm00001e003559_P003	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e005094_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e007411_P001	No alias	transcription factor (NAC)	0.07	Archaeplastida
Zm00001e010094_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e012429_P001	No alias	transcription factor (NAC)	0.08	Archaeplastida
Zm00001e019046_P002	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e021857_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e022155_P001	No alias	transcription factor (NAC)	0.07	Archaeplastida
Zm00001e023108_P001	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e029116_P001	No alias	transcription factor (NAC)	0.07	Archaeplastida
Zm00001e029188_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e029194_P001	No alias	transcription factor (NAC)	0.06	Archaeplastida
Zm00001e029913_P001	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e034574_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e036590_P001	No alias	transcription factor (NAC)	0.07	Archaeplastida
Zm00001e038934_P001	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e041236_P002	No alias	transcription factor (NAC)	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004435	phosphatidylinositol phospholipase C activity	IEP	Neighborhood
MF	GO:0004620	phospholipase activity	IEP	Neighborhood
MF	GO:0004629	phospholipase C activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005524	ATP binding	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006996	organelle organization	IEP	Neighborhood
BP	GO:0007010	cytoskeleton organization	IEP	Neighborhood
MF	GO:0008017	microtubule binding	IEP	Neighborhood
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Neighborhood
MF	GO:0008092	cytoskeletal protein binding	IEP	Neighborhood
MF	GO:0008144	drug binding	IEP	Neighborhood
BP	GO:0009987	cellular process	IEP	Neighborhood
MF	GO:0015631	tubulin binding	IEP	Neighborhood
MF	GO:0016298	lipase activity	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
BP	GO:0035556	intracellular signal transduction	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
BP	GO:0044267	cellular protein metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	12	139

External Links

No external refs found!

LOC_Os06g04090.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation