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  5. LOC_Os06g04520.1

LOC_Os06g04520.1


Description : no hits & (original description: none)


Gene families : OG0009171 (Archaeplastida) Phylogenetic Tree(s): OG0009171_tree ,
OG_05_0009817 (LandPlants) Phylogenetic Tree(s): OG_05_0009817_tree ,
OG_06_0013807 (SeedPlants) Phylogenetic Tree(s): OG_06_0013807_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g04520.1
Cluster HCCA: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00059380 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Neighborhood
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
CC GO:0031248 protein acetyltransferase complex IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
MF GO:0060090 molecular adaptor activity IEP Neighborhood
CC GO:0070461 SAGA-type complex IEP Neighborhood
CC GO:0071203 WASH complex IEP Neighborhood
CC GO:1902493 acetyltransferase complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR028282 WASH-7_central 617 796
IPR028191 WASH-7_N 68 616
No external refs found!