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  5. LOC_Os06g04840.1

LOC_Os06g04840.1


Description : Receptor-like protein EIX2 OS=Solanum lycopersicum (sp|q6jn46|eix2_sollc : 348.0)


Gene families : OG0000160 (Archaeplastida) Phylogenetic Tree(s): OG0000160_tree ,
OG_05_0000080 (LandPlants) Phylogenetic Tree(s): OG_05_0000080_tree ,
OG_06_0017510 (SeedPlants) Phylogenetic Tree(s): OG_06_0017510_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g04840.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00054p00157050 evm_27.TU.AmTr_v1... Receptor-like protein EIX1 OS=Solanum lycopersicum 0.03 Archaeplastida
GSVIVT01012224001 No alias LRR receptor-like serine/threonine-protein kinase RPK2... 0.03 Archaeplastida
GSVIVT01037280001 No alias Probable LRR receptor-like serine/threonine-protein... 0.05 Archaeplastida
LOC_Os10g22920.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Smo104958 No alias Probable leucine-rich repeat receptor-like protein... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 785 844
IPR001611 Leu-rich_rpt 298 311
IPR013210 LRR_N_plant-typ 30 68
IPR001611 Leu-rich_rpt 98 113
No external refs found!