AMTR_s00007p00063550 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00007.33

Description : RNA biosynthesis.transcriptional activation.NAC transcription factor

Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000038 (LandPlants) Phylogenetic Tree(s): OG_05_0000038_tree ,
OG_06_0000025 (SeedPlants) Phylogenetic Tree(s): OG_06_0000025_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00007p00063550
Cluster	HCCA: Cluster_62

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00260100	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
AMTR_s00068p00207380	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.07	Archaeplastida
AMTR_s00099p00131560	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
AT2G24430	ANAC039, NAC038, ANAC038	NAC domain containing protein 38	0.02	Archaeplastida
AT3G04070	anac047, NAC047	NAC domain containing protein 47	0.03	Archaeplastida
AT3G15500	ATNAC3, ANAC055,...	NAC domain containing protein 3	0.03	Archaeplastida
AT3G18400	anac058, NAC058	NAC domain containing protein 58	0.03	Archaeplastida
AT5G18270	ANAC087	Arabidopsis NAC domain containing protein 87	0.03	Archaeplastida
GSVIVT01007194001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
GSVIVT01008291001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.07	Archaeplastida
GSVIVT01018809001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01019993001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01020394001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01027431001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01028354001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.03	Archaeplastida
GSVIVT01035554001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.07	Archaeplastida
Gb_07132	No alias	transcription factor (NAC)	0.09	Archaeplastida
Gb_38935	No alias	transcription factor (NAC)	0.04	Archaeplastida
Gb_40805	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os02g15340.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os02g41450.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os03g42630.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os04g59470.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os05g34600.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os06g04090.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os06g33940.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os06g46270.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os07g37920.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_138461g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_33912g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_40991g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_5017g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
Pp3c3_12890V3.1	No alias	NAC 007	0.02	Archaeplastida
Pp3c3_2470V3.1	No alias	NAC 007	0.03	Archaeplastida
Pp3c4_11490V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Archaeplastida
Smo74950	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
Solyc02g069960.4.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc05g021090.4.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc06g063430.2.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc06g069710.3.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc07g045030.4.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Solyc10g005010.4.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Solyc12g036480.2.1	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e005094_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e007905_P001	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e009234_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e012429_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e019017_P002	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e023635_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e034574_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e034913_P002	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e036720_P002	No alias	transcription factor (NAC)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000159	protein phosphatase type 2A complex	IEP	Neighborhood
MF	GO:0003824	catalytic activity	IEP	Neighborhood
MF	GO:0004175	endopeptidase activity	IEP	Neighborhood
MF	GO:0004252	serine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
MF	GO:0005507	copper ion binding	IEP	Neighborhood
BP	GO:0006508	proteolysis	IEP	Neighborhood
BP	GO:0006807	nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0006952	defense response	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
BP	GO:0008219	cell death	IEP	Neighborhood
MF	GO:0008233	peptidase activity	IEP	Neighborhood
MF	GO:0008236	serine-type peptidase activity	IEP	Neighborhood
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	Neighborhood
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	Neighborhood
MF	GO:0009055	electron transfer activity	IEP	Neighborhood
BP	GO:0009607	response to biotic stimulus	IEP	Neighborhood
BP	GO:0015696	ammonium transport	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016706	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0017171	serine hydrolase activity	IEP	Neighborhood
BP	GO:0019538	protein metabolic process	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0042802	identical protein binding	IEP	Neighborhood
BP	GO:0043086	negative regulation of catalytic activity	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
BP	GO:0043170	macromolecule metabolic process	IEP	Neighborhood
BP	GO:0044092	negative regulation of molecular function	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
BP	GO:0050790	regulation of catalytic activity	IEP	Neighborhood
MF	GO:0051213	dioxygenase activity	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
BP	GO:0065009	regulation of molecular function	IEP	Neighborhood
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Neighborhood
CC	GO:1903293	phosphatase complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	11	138

External Links

No external refs found!

AMTR_s00007p00063550 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation