1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os06g05880.1

LOC_Os06g05880.1


Description : profilin actin nucleation protein


Gene families : OG0001070 (Archaeplastida) Phylogenetic Tree(s): OG0001070_tree ,
OG_05_0001188 (LandPlants) Phylogenetic Tree(s): OG_05_0001188_tree ,
OG_06_0001247 (SeedPlants) Phylogenetic Tree(s): OG_06_0001247_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g05880.1
Cluster HCCA: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00160320 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin... 0.03 Archaeplastida
AT2G19760 PFN1, PRF1 profilin 1 0.03 Archaeplastida
AT2G19770 PRF5 profilin 5 0.03 Archaeplastida
AT4G29340 PRF4 profilin 4 0.05 Archaeplastida
Cpa|evm.model.tig00021434.19 No alias Cytoskeleton.microfilament network.actin... 0.03 Archaeplastida
Cre10.g427250 No alias Cytoskeleton.microfilament network.actin... 0.07 Archaeplastida
GSVIVT01016960001 No alias Cytoskeleton.microfilament network.actin... 0.05 Archaeplastida
GSVIVT01035320001 No alias Cytoskeleton.microfilament network.actin... 0.04 Archaeplastida
Gb_11693 No alias profilin actin nucleation protein 0.02 Archaeplastida
MA_102655g0010 No alias profilin actin nucleation protein 0.05 Archaeplastida
MA_534242g0010 No alias profilin actin nucleation protein 0.02 Archaeplastida
Mp6g13930.1 No alias profilin actin nucleation protein 0.08 Archaeplastida
Mp8g06710.1 No alias profilin actin nucleation protein 0.11 Archaeplastida
Pp3c18_17930V3.1 No alias profilin 3 0.05 Archaeplastida
Solyc08g066110.3.1 No alias profilin actin nucleation protein 0.03 Archaeplastida
Solyc11g070130.2.1 No alias profilin actin nucleation protein 0.02 Archaeplastida
Solyc12g008590.3.1 No alias profilin actin nucleation protein 0.06 Archaeplastida
Solyc12g044630.2.1 No alias profilin actin nucleation protein 0.04 Archaeplastida
Zm00001e032207_P001 No alias profilin actin nucleation protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0036442 proton-exporting ATPase activity IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR005455 PFN 1 130
No external refs found!