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  5. LOC_Os06g06130.1

LOC_Os06g06130.1


Description : ligand-gated cation channel (GLR)


Gene families : OG0000085 (Archaeplastida) Phylogenetic Tree(s): OG0000085_tree ,
OG_05_0015284 (LandPlants) Phylogenetic Tree(s): OG_05_0015284_tree ,
OG_06_0014973 (SeedPlants) Phylogenetic Tree(s): OG_06_0014973_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g06130.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00183760 evm_27.TU.AmTr_v1... Solute transport.channels.GLR ligand-gated cation channel 0.07 Archaeplastida
LOC_Os06g08930.1 No alias ligand-gated cation channel (GLR) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated ion channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001320 Iontro_rcpt 827 869
IPR001828 ANF_lig-bd_rcpt 42 417
IPR001638 Solute-binding_3/MltF_N 512 826
No external refs found!