LOC_Os06g06440.1

Description : subfamily ABCC transporter

Gene families : OG0000058 (Archaeplastida) Phylogenetic Tree(s): OG0000058_tree ,
OG_05_0000363 (LandPlants) Phylogenetic Tree(s): OG_05_0000363_tree ,
OG_06_0001693 (SeedPlants) Phylogenetic Tree(s): OG_06_0001693_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os06g06440.1
Cluster	HCCA: Cluster_14

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00056p00223220	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
GSVIVT01010326001	No alias	Solute transport.primary active transport.ABC...	0.02	Archaeplastida
LOC_Os01g07870.1	No alias	subfamily ABCC transporter	0.07	Archaeplastida
LOC_Os04g49890.1	No alias	subfamily ABCC transporter	0.05	Archaeplastida
MA_10436190g0030	No alias	ABC transporter C family member 10 OS=Arabidopsis...	0.03	Archaeplastida
MA_42556g0010	No alias	subfamily ABCC transporter	0.04	Archaeplastida
MA_629244g0010	No alias	subfamily ABCC transporter	0.02	Archaeplastida
Smo144775	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
Smo163772	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Smo163776	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
Smo267218	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
Smo402326	No alias	Solute transport.primary active transport.ABC...	0.04	Archaeplastida
Solyc08g006880.3.1	No alias	subfamily ABCC transporter	0.03	Archaeplastida
Solyc10g024420.3.1	No alias	subfamily ABCC transporter	0.02	Archaeplastida
Zm00001e003542_P001	No alias	subfamily ABCC transporter	0.03	Archaeplastida
Zm00001e007114_P002	No alias	subfamily ABCC transporter	0.04	Archaeplastida
Zm00001e026288_P002	No alias	subfamily ABCC transporter	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Neighborhood
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	Neighborhood
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0019842	vitamin binding	IEP	Neighborhood
MF	GO:0030170	pyridoxal phosphate binding	IEP	Neighborhood
MF	GO:0051213	dioxygenase activity	IEP	Neighborhood
MF	GO:0070279	vitamin B6 binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	303	570
IPR011527	ABC1_TM_dom	920	1167
IPR003439	ABC_transporter-like	1246	1394
IPR003439	ABC_transporter-like	635	769

External Links

No external refs found!

LOC_Os06g06440.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation