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  5. LOC_Os06g06600.1

LOC_Os06g06600.1


Description : F-box/FBD/LRR-repeat protein At1g13570 OS=Arabidopsis thaliana (sp|q9fz70|fdl1_arath : 81.6)


Gene families : OG0002627 (Archaeplastida) Phylogenetic Tree(s): OG0002627_tree ,
OG_05_0001741 (LandPlants) Phylogenetic Tree(s): OG_05_0001741_tree ,
OG_06_0000951 (SeedPlants) Phylogenetic Tree(s): OG_06_0000951_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g06600.1
Cluster HCCA: Cluster_650

Target Alias Description ECC score Gene Family Method Actions
Zm00001e006615_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
CC GO:0030289 protein phosphatase 4 complex IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR006566 FBD 394 432
No external refs found!