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  5. AMTR_s00007p00077270

AMTR_s00007p00077270 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00007.42

Description : RNA biosynthesis.transcriptional activation.Alfin-like transcription factor


Gene families : OG0000328 (Archaeplastida) Phylogenetic Tree(s): OG0000328_tree ,
OG_05_0000344 (LandPlants) Phylogenetic Tree(s): OG_05_0000344_tree ,
OG_06_0003234 (SeedPlants) Phylogenetic Tree(s): OG_06_0003234_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00007p00077270
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
Zm00001e018350_P001 No alias Alfin-like transcription factor 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
MF GO:0004743 pyruvate kinase activity IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
CC GO:0005751 mitochondrial respiratory chain complex IV IEP Neighborhood
CC GO:0005758 mitochondrial intermembrane space IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0009790 embryo development IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016530 metallochaperone activity IEP Neighborhood
MF GO:0016531 copper chaperone activity IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0030955 potassium ion binding IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0031420 alkali metal ion binding IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031970 organelle envelope lumen IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045277 respiratory chain complex IV IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
CC GO:0070069 cytochrome complex IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
CC GO:0098803 respiratory chain complex IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 186 234
IPR021998 Alfin 9 138
No external refs found!