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  5. LOC_Os06g06740.1

LOC_Os06g06740.1


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000288 (LandPlants) Phylogenetic Tree(s): OG_05_0000288_tree ,
OG_06_0000157 (SeedPlants) Phylogenetic Tree(s): OG_06_0000157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g06740.1
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00225600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT5G40330 ATMYBRTF, ATMYB23, MYB23 myb domain protein 23 0.03 Archaeplastida
AT5G40430 MYB22, AtMYB22 myb domain protein 22 0.02 Archaeplastida
GSVIVT01026481001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01028171001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01029941001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Gb_09998 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os07g43580.1 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10190951g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_128871g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_246142g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_616952g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_926162g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_948059g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c1_1650V3.1 No alias myb domain protein 105 0.03 Archaeplastida
Pp3c24_11770V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c25_3170V3.1 No alias myb domain protein 16 0.02 Archaeplastida
Solyc03g116100.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e007422_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e016583_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e023100_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e025867_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e026426_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e032347_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e034072_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e037956_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e041239_P001 No alias transcription factor (MYB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004664 prephenate dehydratase activity IEP Neighborhood
BP GO:0006558 L-phenylalanine metabolic process IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
BP GO:0009094 L-phenylalanine biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Neighborhood
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!