LOC_Os06g07030.1

Description : transcription factor (DREB)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0001540 (SeedPlants) Phylogenetic Tree(s): OG_06_0001540_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os06g07030.1
Cluster	HCCA: Cluster_225

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00016p00238800	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
AMTR_s00026p00180130	evm_27.TU.AmTr_v1...	Ethylene-responsive transcription factor ERF084...	0.02	Archaeplastida
AMTR_s00039p00088760	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AT1G64380	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G75490	No alias	Integrase-type DNA-binding superfamily protein	0.17	Archaeplastida
AT2G20880	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT4G28140	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
AT4G31060	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
AT5G11590	TINY2	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G13910	LEP	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G18450	No alias	Integrase-type DNA-binding superfamily protein	0.1	Archaeplastida
AT5G18560	PUCHI	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Cre08.g364400	No alias	No description available	0.01	Archaeplastida
Cre16.g649433	No alias	No description available	0.01	Archaeplastida
GSVIVT01008649001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	Archaeplastida
GSVIVT01009801001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.16	Archaeplastida
GSVIVT01032983001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
Gb_00745	No alias	transcription factor (DREB)	0.03	Archaeplastida
Gb_16683	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_19320	No alias	transcription factor (ERF)	0.02	Archaeplastida
Gb_32995	No alias	Ethylene-responsive transcription factor ERF016...	0.03	Archaeplastida
Gb_38187	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os05g36100.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
LOC_Os08g35240.1	No alias	Ethylene-responsive transcription factor ERF017...	0.03	Archaeplastida
LOC_Os10g22600.1	No alias	transcription factor (DREB)	0.01	Archaeplastida
MA_10274g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_113446g0010	No alias	transcription factor (DREB)	0.01	Archaeplastida
MA_162045g0010	No alias	transcription factor (DREB)	0.05	Archaeplastida
MA_201698g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_33394g0020	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_54341g0010	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
MA_8384767g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
Mp5g01050.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Pp3c10_11910V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c15_1990V3.1	No alias	erf domain protein 9	0.01	Archaeplastida
Pp3c16_17550V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
Pp3c4_27870V3.1	No alias	ethylene responsive element binding factor 1	0.01	Archaeplastida
Solyc01g090340.3.1	No alias	Ethylene-responsive transcription factor 13...	0.02	Archaeplastida
Solyc01g090370.3.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc02g090790.1.1	No alias	transcription factor (ERF)	0.15	Archaeplastida
Solyc02g090800.1.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc03g095973.1.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Solyc03g095977.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc03g117130.3.1	No alias	transcription factor (ERF)	0.04	Archaeplastida
Solyc03g118190.4.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc04g050750.2.1	No alias	transcription factor (DREB)	0.2	Archaeplastida
Solyc04g078640.3.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc04g080910.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc05g051200.1.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Solyc06g066540.1.1	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e000400_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e003707_P001	No alias	no hits & (original description: none)	0.05	Archaeplastida
Zm00001e003858_P001	No alias	transcription factor (DREB)	0.06	Archaeplastida
Zm00001e004208_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e007351_P001	No alias	transcription factor (ERF)	0.24	Archaeplastida
Zm00001e008306_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e015314_P001	No alias	transcription factor (ERF)	0.05	Archaeplastida
Zm00001e019837_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e020274_P001	No alias	transcription factor (ERF)	0.23	Archaeplastida
Zm00001e022016_P001	No alias	transcription factor (DREB)	0.02	Archaeplastida
Zm00001e023759_P001	No alias	Ethylene-responsive transcription factor ERF017...	0.06	Archaeplastida
Zm00001e023804_P001	No alias	Ethylene-responsive transcription factor ERF013...	0.04	Archaeplastida
Zm00001e026989_P001	No alias	transcription factor (ERF)	0.04	Archaeplastida
Zm00001e031497_P001	No alias	Ethylene-responsive transcription factor ABI4 OS=Oryza...	0.05	Archaeplastida
Zm00001e031783_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e033537_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e034242_P001	No alias	transcription factor (ERF)	0.02	Archaeplastida
Zm00001e036401_P001	No alias	transcription factor (DREB)	0.22	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	IEP	Neighborhood
BP	GO:0003006	developmental process involved in reproduction	IEP	Neighborhood
MF	GO:0003729	mRNA binding	IEP	Neighborhood
MF	GO:0003872	6-phosphofructokinase activity	IEP	Neighborhood
CC	GO:0005811	lipid droplet	IEP	Neighborhood
CC	GO:0005849	mRNA cleavage factor complex	IEP	Neighborhood
BP	GO:0006351	transcription, DNA-templated	IEP	Neighborhood
BP	GO:0006378	mRNA polyadenylation	IEP	Neighborhood
BP	GO:0007275	multicellular organism development	IEP	Neighborhood
MF	GO:0008061	chitin binding	IEP	Neighborhood
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Neighborhood
MF	GO:0008443	phosphofructokinase activity	IEP	Neighborhood
BP	GO:0009415	response to water	IEP	Neighborhood
BP	GO:0009628	response to abiotic stimulus	IEP	Neighborhood
BP	GO:0009790	embryo development	IEP	Neighborhood
BP	GO:0009793	embryo development ending in seed dormancy	IEP	Neighborhood
BP	GO:0010035	response to inorganic substance	IEP	Neighborhood
CC	GO:0012511	monolayer-surrounded lipid storage body	IEP	Neighborhood
CC	GO:0016021	integral component of membrane	IEP	Neighborhood
BP	GO:0018130	heterocycle biosynthetic process	IEP	Neighborhood
MF	GO:0019200	carbohydrate kinase activity	IEP	Neighborhood
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Neighborhood
BP	GO:0022414	reproductive process	IEP	Neighborhood
BP	GO:0031123	RNA 3'-end processing	IEP	Neighborhood
BP	GO:0031124	mRNA 3'-end processing	IEP	Neighborhood
CC	GO:0031224	intrinsic component of membrane	IEP	Neighborhood
BP	GO:0032501	multicellular organismal process	IEP	Neighborhood
BP	GO:0032502	developmental process	IEP	Neighborhood
BP	GO:0032774	RNA biosynthetic process	IEP	Neighborhood
CC	GO:0033643	host cell part	IEP	Neighborhood
CC	GO:0033646	host intracellular part	IEP	Neighborhood
CC	GO:0033647	host intracellular organelle	IEP	Neighborhood
CC	GO:0033648	host intracellular membrane-bounded organelle	IEP	Neighborhood
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Neighborhood
CC	GO:0042025	host cell nucleus	IEP	Neighborhood
BP	GO:0042221	response to chemical	IEP	Neighborhood
CC	GO:0043226	organelle	IEP	Neighborhood
CC	GO:0043228	non-membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043229	intracellular organelle	IEP	Neighborhood
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
BP	GO:0043631	RNA polyadenylation	IEP	Neighborhood
CC	GO:0044217	other organism part	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
MF	GO:0045735	nutrient reservoir activity	IEP	Neighborhood
BP	GO:0048856	anatomical structure development	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
BP	GO:0097659	nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Neighborhood
BP	GO:1901700	response to oxygen-containing compound	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	44	93

External Links

No external refs found!

LOC_Os06g07030.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation