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  5. LOC_Os06g07100.2

LOC_Os06g07100.2


Description : RING-H2-class E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0001120 (LandPlants) Phylogenetic Tree(s): OG_05_0001120_tree ,
OG_06_0020257 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g07100.2
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00203540 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00009p00172890 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00012p00151770 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00059p00176670 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AMTR_s00077p00070720 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00077p00074350 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00102p00069840 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00152p00054630 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT1G15100 RHA2A RING-H2 finger A2A 0.03 Archaeplastida
AT1G72200 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT1G72220 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT2G17450 RHA3A RING-H2 finger A3A 0.03 Archaeplastida
AT2G17730 NIP2 NEP-interacting protein 2 0.04 Archaeplastida
AT2G37580 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT2G47560 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT3G03550 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT3G10910 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G14320 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.02 Archaeplastida
AT3G16720 ATL2, TL2 TOXICOS EN LEVADURA 2 0.03 Archaeplastida
AT3G61460 BRH1 brassinosteroid-responsive RING-H2 0.04 Archaeplastida
AT3G61550 No alias RING/U-box superfamily protein 0.07 Archaeplastida
AT4G11370 RHA1A RING-H2 finger A1A 0.02 Archaeplastida
AT4G15975 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G17905 ATL4H RING/U-box superfamily protein 0.03 Archaeplastida
AT4G24015 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT4G38140 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G06490 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G07040 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G17600 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Cpa|evm.model.tig00020629.137 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
GSVIVT01000015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01007793001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01009096001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01012018001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01026978001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01027769001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01036593001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Gb_03946 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_05386 No alias RHA2 signal transducer of abscisic acid perception 0.03 Archaeplastida
Gb_14778 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_14821 No alias RHA2 signal transducer of abscisic acid perception 0.02 Archaeplastida
Gb_15297 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_20461 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_23066 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_28973 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.03 Archaeplastida
Gb_32878 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Gb_40644 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g16120.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g53500.1 No alias RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g55110.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g45710.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g46600.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
LOC_Os02g54830.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os03g05560.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
LOC_Os04g16970.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g07140.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os05g29710.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os06g09310.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os07g34180.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g34550.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os09g37050.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os10g42390.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_10021g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_10145129g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_117647g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_125507g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_133839g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_152783g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_26001g0020 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_31736g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_391931g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_61738g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_7120568g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_8556123g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8710804g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp5g08270.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Mp7g06030.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Pp3c14_14600V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c14_22300V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c1_32230V3.1 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Pp3c1_9560V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c20_12240V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c22_15440V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c22_17730V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c23_10580V3.1 No alias RING/U-box superfamily protein 0.05 Archaeplastida
Pp3c26_11650V3.1 No alias TOXICOS EN LEVADURA 2 0.04 Archaeplastida
Pp3c4_30240V3.1 No alias TOXICOS EN LEVADURA 2 0.03 Archaeplastida
Pp3c5_4170V3.1 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Solyc01g066430.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc01g095810.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc02g087040.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc03g005490.4.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc03g114190.1.1 No alias RING-H2 finger protein ATL56 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc03g123680.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc04g074820.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc06g061250.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc07g006360.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc08g082680.3.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc09g066300.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc09g089890.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc10g009487.1.1 No alias RING-H2 finger protein ATL20 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc10g081790.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc11g005300.2.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc11g005320.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc12g094690.1.1 No alias RING-H2 finger protein ATL8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e000398_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e002233_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e002272_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e003126_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e003264_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e007103_P001 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Zm00001e007122_P001 No alias E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e007129_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e007956_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e008560_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e011306_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e011901_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e013809_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e014286_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e015449_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e015495_P001 No alias RING-H2-class E3 ligase 0.1 Archaeplastida
Zm00001e016470_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e017959_P001 No alias RING-H2 finger protein ATL70 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e019779_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e019884_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e020958_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e022175_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e023585_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e023908_P006 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e023969_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e026906_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e030102_P001 No alias RING-H2-class E3 ligase 0.07 Archaeplastida
Zm00001e030930_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e031439_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e032186_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e034421_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e035560_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e036289_P001 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e036691_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e038107_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e039314_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
BP GO:0035434 copper ion transmembrane transport IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 130 173
No external refs found!