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  5. LOC_Os06g07640.1

LOC_Os06g07640.1


Description : transcription factor (MYB-related)


Gene families : OG0000067 (Archaeplastida) Phylogenetic Tree(s): OG0000067_tree ,
OG_05_0000498 (LandPlants) Phylogenetic Tree(s): OG_05_0000498_tree ,
OG_06_0010290 (SeedPlants) Phylogenetic Tree(s): OG_06_0010290_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g07640.1
Cluster HCCA: Cluster_479

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00065610 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT3G10590 No alias Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
AT4G36570 ATRL3, RL3 RAD-like 3 0.04 Archaeplastida
AT5G05790 No alias Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
AT5G56840 No alias myb-like transcription factor family protein 0.02 Archaeplastida
GSVIVT01009716001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01009723001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01016370001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01036090001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
LOC_Os01g41900.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os03g62100.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_16729g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_209399g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_488767g0010 No alias transcription factor (MYB-related) 0.04 Archaeplastida
MA_6326342g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Solyc02g082390.1.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc04g008870.3.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Solyc11g071500.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e010716_P001 No alias transcription factor (MYB-related) 0.05 Archaeplastida
Zm00001e019254_P001 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e020381_P001 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e025446_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e025783_P002 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e025946_P002 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e027520_P001 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e027835_P005 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e032519_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e032520_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e036372_P001 No alias transcription factor (MYB-related) 0.05 Archaeplastida
Zm00001e040398_P001 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e040399_P001 No alias transcription factor (MYB-related) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 178 220
No external refs found!