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  5. LOC_Os06g07830.1

LOC_Os06g07830.1


Description : Putative clathrin assembly protein At5g35200 OS=Arabidopsis thaliana (sp|q9lhs0|cap10_arath : 490.0)


Gene families : OG0000302 (Archaeplastida) Phylogenetic Tree(s): OG0000302_tree ,
OG_05_0000981 (LandPlants) Phylogenetic Tree(s): OG_05_0000981_tree ,
OG_06_0005759 (SeedPlants) Phylogenetic Tree(s): OG_06_0005759_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g07830.1
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AT1G03050 No alias ENTH/ANTH/VHS superfamily protein 0.03 Archaeplastida
GSVIVT01023714001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 Archaeplastida
GSVIVT01029746001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 Archaeplastida
GSVIVT01035864001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 Archaeplastida
LOC_Os02g07900.1 No alias ECA1/2 clathrin coated vesicle adaptor protein 0.04 Archaeplastida
LOC_Os02g55970.1 No alias Putative clathrin assembly protein At5g35200... 0.03 Archaeplastida
LOC_Os06g45050.1 No alias Putative clathrin assembly protein At5g57200... 0.03 Archaeplastida
MA_18247g0010 No alias Probable clathrin assembly protein At4g32285... 0.03 Archaeplastida
Solyc11g044860.3.1 No alias ECA1/2 clathrin coated vesicle adaptor protein 0.03 Archaeplastida
Zm00001e013776_P003 No alias ECA1/2 clathrin coated vesicle adaptor protein 0.05 Archaeplastida
Zm00001e023668_P001 No alias Putative clathrin assembly protein At5g35200... 0.02 Archaeplastida
Zm00001e030401_P001 No alias ECA1/2 clathrin coated vesicle adaptor protein 0.06 Archaeplastida
Zm00001e031059_P001 No alias Putative clathrin assembly protein At5g35200... 0.08 Archaeplastida
Zm00001e036365_P001 No alias Putative clathrin assembly protein At5g35200... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004363 glutathione synthase activity IEP Neighborhood
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004620 phospholipase activity IEP Neighborhood
MF GO:0004629 phospholipase C activity IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006749 glutathione metabolic process IEP Neighborhood
BP GO:0006750 glutathione biosynthetic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016881 acid-amino acid ligase activity IEP Neighborhood
BP GO:0019184 nonribosomal peptide biosynthetic process IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
CC GO:0046658 anchored component of plasma membrane IEP Neighborhood
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Neighborhood
InterPro domains Description Start Stop
IPR011417 ANTH_dom 35 301
No external refs found!