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  5. LOC_Os06g08250.1

LOC_Os06g08250.1


Description : no hits & (original description: none)


Gene families : OG0000041 (Archaeplastida) Phylogenetic Tree(s): OG0000041_tree ,
OG_05_0000046 (LandPlants) Phylogenetic Tree(s): OG_05_0000046_tree ,
OG_06_0002651 (SeedPlants) Phylogenetic Tree(s): OG_06_0002651_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g08250.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00250160 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00157p00061490 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT1G21960 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT1G60360 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT1G68180 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT2G15580 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT2G29840 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT3G13228 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT3G51325 No alias RING/U-box superfamily protein 0.01 Archaeplastida
AT5G20910 AIP2 RING/U-box superfamily protein 0.02 Archaeplastida
GSVIVT01008897001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
GSVIVT01020763001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
GSVIVT01022973001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01024920001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
GSVIVT01034134001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Gb_11308 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g74040.1 No alias Probable E3 ubiquitin-protein ligase RHC2A... 0.02 Archaeplastida
LOC_Os03g26420.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g01940.1 No alias elicitor peptide precursor (proPEP) 0.02 Archaeplastida
MA_3413240g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp7g04520.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c1_42450V3.1 No alias RING/U-box superfamily protein 0.01 Archaeplastida
Solyc01g104260.3.1 No alias Probable E3 ubiquitin-protein ligase RHC1A... 0.02 Archaeplastida
Zm00001e029660_P001 No alias E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e030803_P001 No alias Probable E3 ubiquitin-protein ligase RHC1A... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 160 205
No external refs found!