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  5. LOC_Os06g08440.1

LOC_Os06g08440.1


Description : B-type cytokinin ARR response activator. transcription factor (ARR-B)


Gene families : OG0000192 (Archaeplastida) Phylogenetic Tree(s): OG0000192_tree ,
OG_05_0000364 (LandPlants) Phylogenetic Tree(s): OG_05_0000364_tree ,
OG_06_0000306 (SeedPlants) Phylogenetic Tree(s): OG_06_0000306_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g08440.1
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00081480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.ARR-B... 0.02 Archaeplastida
AMTR_s00057p00108840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.ARR-B... 0.03 Archaeplastida
AT3G10760 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
GSVIVT01007550001 No alias RNA biosynthesis.transcriptional activation.ARR-B... 0.05 Archaeplastida
GSVIVT01010300001 No alias RNA biosynthesis.transcriptional activation.ARR-B... 0.04 Archaeplastida
GSVIVT01035051001 No alias RNA biosynthesis.transcriptional activation.ARR-B... 0.04 Archaeplastida
Mp4g20600.1 No alias B-type cytokinin ARR response activator. transcription... 0.02 Archaeplastida
Pp3c8_21000V3.1 No alias response regulator 2 0.02 Archaeplastida
Solyc05g054390.4.1 No alias B-type cytokinin ARR response activator. transcription... 0.05 Archaeplastida
Zm00001e028539_P002 No alias B-type cytokinin ARR response activator. transcription... 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 28 137
IPR001005 SANT/Myb 219 269
No external refs found!