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  5. LOC_Os06g09130.1

LOC_Os06g09130.1


Description : ligand-gated cation channel (GLR)


Gene families : OG0000085 (Archaeplastida) Phylogenetic Tree(s): OG0000085_tree ,
OG_05_0000261 (LandPlants) Phylogenetic Tree(s): OG_05_0000261_tree ,
OG_06_0000114 (SeedPlants) Phylogenetic Tree(s): OG_06_0000114_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g09130.1
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
AT2G24720 GLR2.2, ATGLR2.2 glutamate receptor 2.2 0.02 Archaeplastida
AT2G29120 GLR2.7, ATGLR2.7 glutamate receptor 2.7 0.02 Archaeplastida
AT5G27100 GLR2.1, ATGLR2.1 glutamate receptor 2.1 0.03 Archaeplastida
GSVIVT01033142001 No alias Solute transport.channels.GLR ligand-gated cation channel 0.07 Archaeplastida
MA_110963g0010 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
MA_32301g0010 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida
MA_46902g0010 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
Solyc04g078860.4.1 No alias ligand-gated cation channel (GLR) 0.03 Archaeplastida
Solyc08g006500.4.1 No alias ligand-gated cation channel (GLR) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0015276 ligand-gated ion channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001320 Iontro_rcpt 593 624
IPR001828 ANF_lig-bd_rcpt 2 189
IPR001638 Solute-binding_3/MltF_N 274 592
No external refs found!