1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os06g09570.1

LOC_Os06g09570.1


Description : NOG1 LSU processome regulatory GTPase


Gene families : OG0003912 (Archaeplastida) Phylogenetic Tree(s): OG0003912_tree ,
OG_05_0003948 (LandPlants) Phylogenetic Tree(s): OG_05_0003948_tree ,
OG_06_0004055 (SeedPlants) Phylogenetic Tree(s): OG_06_0004055_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g09570.1
Cluster HCCA: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
AT1G50920 No alias Nucleolar GTP-binding protein 0.04 Archaeplastida
Cpa|evm.model.tig00021432.35 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
MA_89272g0010 No alias NOG1 LSU processome regulatory GTPase 0.02 Archaeplastida
Mp6g16060.1 No alias NOG1 LSU processome regulatory GTPase 0.03 Archaeplastida
Pp3c23_20710V3.1 No alias Nucleolar GTP-binding protein 0.04 Archaeplastida
Solyc01g081010.4.1 No alias NOG1 LSU processome regulatory GTPase 0.08 Archaeplastida
Zm00001e030762_P002 No alias NOG1 LSU processome regulatory GTPase 0.03 Archaeplastida
Zm00001e036251_P001 No alias NOG1 LSU processome regulatory GTPase 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004455 ketol-acid reductoisomerase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009081 branched-chain amino acid metabolic process IEP Neighborhood
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0061608 nuclear import signal receptor activity IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
MF GO:0140142 nucleocytoplasmic carrier activity IEP Neighborhood
InterPro domains Description Start Stop
IPR012973 NOG_C 412 465
IPR010674 NOG1_Rossman_fold_dom 236 292
No external refs found!