LOC_Os06g09717.1

Description : Ethylene-responsive transcription factor ERF018 OS=Arabidopsis thaliana (sp|q9s7l5|erf18_arath : 105.0)

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000218 (SeedPlants) Phylogenetic Tree(s): OG_06_0000218_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os06g09717.1
Cluster	HCCA: Cluster_337

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00147970	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	Archaeplastida
AT4G27950	CRF4	cytokinin response factor 4	0.04	Archaeplastida
AT4G32800	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G61590	No alias	Integrase-type DNA-binding superfamily protein	0.04	Archaeplastida
GSVIVT01028315001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
Gb_02790	No alias	transcription factor (ERF)	0.03	Archaeplastida
Gb_29168	No alias	Ethylene-responsive transcription factor ERF012...	0.03	Archaeplastida
LOC_Os04g56150.1	No alias	transcription factor (ERF)	0.06	Archaeplastida
LOC_Os06g08340.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
LOC_Os06g09760.1	No alias	Ethylene-responsive transcription factor ERF018...	0.06	Archaeplastida
LOC_Os11g13840.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_179692g0020	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_329325g0010	No alias	transcription factor (ERF)	0.05	Archaeplastida
MA_4481564g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_93229g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_9905g0010	No alias	transcription factor (ERF)	0.03	Archaeplastida
Mp6g04880.1	No alias	Ethylene-responsive transcription factor ERF008...	0.03	Archaeplastida
Pp3c11_10660V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c1_27630V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
Pp3c2_15730V3.1	No alias	cytokinin response factor 5	0.03	Archaeplastida
Pp3c2_36690V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c6_20480V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Smo104978	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.05	Archaeplastida
Solyc01g005630.3.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Solyc01g090370.3.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc04g072300.1.1	No alias	Ethylene-responsive transcription factor FZP OS=Oryza...	0.03	Archaeplastida
Solyc05g051180.3.1	No alias	transcription factor (ERF)	0.05	Archaeplastida
Solyc08g078410.2.1	No alias	transcription factor (DREB)	0.06	Archaeplastida
Zm00001e000609_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e000611_P001	No alias	Ethylene-responsive transcription factor ERF073...	0.02	Archaeplastida
Zm00001e003579_P001	No alias	Ethylene-responsive transcription factor ERF015...	0.02	Archaeplastida
Zm00001e010609_P001	No alias	transcription factor (ERF). transcription factor (ERN1)	0.07	Archaeplastida
Zm00001e014659_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e023159_P001	No alias	transcription factor (DREB)	0.05	Archaeplastida
Zm00001e034661_P001	No alias	Ethylene-responsive transcription factor ERF115...	0.02	Archaeplastida
Zm00001e034741_P001	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0005506	iron ion binding	IEP	Neighborhood
MF	GO:0010181	FMN binding	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	10	54

External Links

No external refs found!

LOC_Os06g09717.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation