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  5. LOC_Os06g10820.1

LOC_Os06g10820.1


Description : transcription factor (bHLH)


Gene families : OG0000092 (Archaeplastida) Phylogenetic Tree(s): OG0000092_tree ,
OG_05_0000040 (LandPlants) Phylogenetic Tree(s): OG_05_0000040_tree ,
OG_06_0000031 (SeedPlants) Phylogenetic Tree(s): OG_06_0000031_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os06g10820.1
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AT3G59060 PIL6, PIF5 phytochrome interacting factor 3-like 6 0.03 Archaeplastida
AT4G00120 GT140, IND1, IND, EDA33 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
Gb_12264 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc04g078690.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e017430_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e025656_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e034339_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006952 defense response IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 130 169
No external refs found!