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  5. AMTR_s00007p00126220

AMTR_s00007p00126220 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00007.79

Description : Cytoskeleton.microfilament network.actin polymerisation.cofilin-like actin depolymerizing factor


Gene families : OG0000480 (Archaeplastida) Phylogenetic Tree(s): OG0000480_tree ,
OG_05_0000447 (LandPlants) Phylogenetic Tree(s): OG_05_0000447_tree ,
OG_06_0001449 (SeedPlants) Phylogenetic Tree(s): OG_06_0001449_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00007p00126220
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
AT1G01750 ADF11 actin depolymerizing factor 11 0.03 Archaeplastida
AT4G00680 ADF8 actin depolymerizing factor 8 0.02 Archaeplastida
AT5G52360 ADF10 actin depolymerizing factor 10 0.03 Archaeplastida
GSVIVT01026879001 No alias Cytoskeleton.microfilament network.actin... 0.07 Archaeplastida
GSVIVT01028963001 No alias Cytoskeleton.microfilament network.actin... 0.06 Archaeplastida
LOC_Os02g44470.1 No alias actin-depolymerizing factor 0.06 Archaeplastida
LOC_Os04g46910.1 No alias actin-depolymerizing factor 0.05 Archaeplastida
LOC_Os07g30090.2 No alias actin-depolymerizing factor 0.05 Archaeplastida
Mp3g20570.1 No alias actin-depolymerizing factor 0.03 Archaeplastida
Solyc01g094400.3.1 No alias actin-depolymerizing factor 0.05 Archaeplastida
Solyc03g025750.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e002133_P002 No alias actin-depolymerizing factor 0.02 Archaeplastida
Zm00001e007293_P001 No alias actin-depolymerizing factor 0.03 Archaeplastida
Zm00001e010368_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e015357_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e023183_P001 No alias actin-depolymerizing factor 0.05 Archaeplastida
Zm00001e034985_P001 No alias actin-depolymerizing factor 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005811 lipid droplet IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Neighborhood
CC GO:0012511 monolayer-surrounded lipid storage body IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR002108 ADF-H 12 136
No external refs found!